RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 LRRC43Q8N309 656 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 CAAP1Q9H8G2 361 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 ADA2Q9NZK5 511 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 SQORQ9Y6N5 450 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 CABYRO75952 493 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 C8BP07358 591 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 MCF2P10911 925 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 PTPRAP18433 802 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 MAGEA8P43361 318 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 CLCN3P51790 818 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 LSMEM2Q8N112 164 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 BBS5Q8N3I7 341 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 RIN3Q8TB24 985 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 SNRNP27Q8WVK2 155 aaKnown RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 LRTOMTQ8WZ04 291 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 MRPL45Q9BRJ2 306 aaKnown RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 TMEM79Q9BSE2 394 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 OLAHQ9NV23 265 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 VANGL2Q9ULK5 521 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 C9IYK1 514 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 CSPG5O95196 566 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.52
SPC24-206ENST00000592540 EGFRP00533 1210 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 PRKAA2P54646 552 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 CXCL9Q07325 125 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 MPP3Q13368 585 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 TRIM25Q14258 630 aaKnown RBP18.27■□□□□ 0.52
SPC24-206ENST00000592540 FRG1Q14331 258 aaKnown RBP18.27■□□□□ 0.52
SPC24-206ENST00000592540 DHRS4L2Q6PKH6 230 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 PID1Q7Z2X4 250 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 PTAR1Q7Z6K3 402 aaPredicted RBP18.27■□□□□ 0.52
SPC24-206ENST00000592540 MCMBPQ9BTE3 642 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 C1QTNF1Q9BXJ1 281 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 PRDM12Q9H4Q4 367 aa18.27■□□□□ 0.52
SPC24-206ENST00000592540 NDST2P52849 883 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 CSE1LP55060 971 aaKnown RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 PSME3P61289 254 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 EFCAB12Q6NXP0 572 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 MAMDC4Q6UXC1 1216 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 MFSD3Q96ES6 412 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 WRNIP1Q96S55 665 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 PCDHAC1Q9H158 963 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 TRPV6Q9H1D0 765 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 PNPLA3Q9NST1 481 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 PRMT7Q9NVM4 692 aaPredicted RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 RRN3Q9NYV6 651 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 BFARQ9NZS9 450 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 RCOR3Q9P2K3 495 aaPredicted RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 SUCOQ9UBS9 1254 aaKnown RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 SLC39A10Q9ULF5 831 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 FZD10Q9ULW2 581 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 FAF1Q9UNN5 650 aaPredicted RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 NME7Q9Y5B8 376 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 PCDHGA7Q9Y5G6 932 aa18.27■□□□□ 0.51
SPC24-206ENST00000592540 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.51
SPC24-206ENST00000592540 FGFR3P22607 806 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 TUBA4AP68366 448 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 NBPF12Q5TAG4 269 aaPredicted RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 KRT80Q6KB66 452 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 EEPD1Q7L9B9 569 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 FAM131BQ86XD5 332 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 CROCCP3Q8IVE0 287 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 MYO1HQ8N1T3 1032 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 PCDH20Q8N6Y1 951 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 TRPC4APQ8TEL6 797 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 RMND5BQ96G75 393 aaPredicted RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 CPB2Q96IY4 423 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 SLC29A1Q99808 456 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 UTP6Q9NYH9 597 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 ANKRD6Q9Y2G4 727 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 ATP6V1G1O75348 118 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 HSPA1AP0DMV8 641 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 HSPA1BP0DMV9 641 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 LCP1P13796 627 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 STT3AP46977 705 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 GLRBP48167 497 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 PSMD8P48556 350 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 RHDQ02161 417 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 HSDL1Q3SXM5 330 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 KCNMB4Q86W47 210 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 PSTKQ8IV42 348 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 RANBP9Q96S59 729 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 GPR20Q99678 358 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 LPIN3Q9BQK8 851 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
SPC24-206ENST00000592540 HOXC10Q9NYD6 342 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 TLK1Q9UKI8 766 aa18.26■□□□□ 0.51
SPC24-206ENST00000592540 KCNU1A8MYU2 1149 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 AP2A1O95782 977 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 TGFB3P10600 412 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 CSRP3P50461 194 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms