RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.78□□□□□ -1.8
VMP1-212ENST00000591782 NOL7Q9UMY1 257 aaKnown RBP3.78□□□□□ -1.8
VMP1-212ENST00000591782 COG5Q9UP83 839 aa3.78□□□□□ -1.8
VMP1-212ENST00000591782 DNAJC16Q9Y2G8 782 aa3.78□□□□□ -1.8
VMP1-212ENST00000591782 AFG3L2Q9Y4W6 797 aa3.78□□□□□ -1.8
VMP1-212ENST00000591782 SCINQ9Y6U3 715 aa3.78□□□□□ -1.8
VMP1-212ENST00000591782 MYO15BQ96JP2 1530 aa3.78□□□□□ -1.8
VMP1-212ENST00000591782 CC2D2AQ9P2K1 1620 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZNF335Q9H4Z2 1342 aaPredicted RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 FOXO6A8MYZ6 492 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZNF814B7Z6K7 855 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 SYN3O14994 580 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 PRPF4O43172 522 aaKnown RBP eCLIP3.77□□□□□ -1.81
VMP1-212ENST00000591782 TLX3O43711 291 aaPredicted RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 CCDC159P0C7I6 412 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 CYP4B1P13584 511 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 STAT1P42224 750 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 PPM1FP49593 454 aaPredicted RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 SRSF1Q07955 248 aaKnown RBP eCLIP3.77□□□□□ -1.81
VMP1-212ENST00000591782 THOC5Q13769 683 aaKnown RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 DLGAP5Q15398 846 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 CTXN3Q4LDR2 81 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 RUNDC3AQ59EK9 446 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ISM2Q6H9L7 571 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 B4GALNT4Q76KP1 1039 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 OTUD6AQ7L8S5 288 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 MRPL10Q7Z7H8 261 aaKnown RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 LMNTD2Q8IXW0 634 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 NRACQ8N912 160 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 SLC44A5Q8NCS7 719 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZNF548Q8NEK5 533 aaPredicted RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 MYRIPQ8NFW9 859 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 GCC1Q96CN9 775 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZSCAN31Q96LW9 406 aaPredicted RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 TIGD1Q96MW7 591 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 IWS1Q96ST2 819 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 PYM1Q9BRP8 204 aaKnown RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 TRMOQ9BU70 441 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZNF304Q9HCX3 659 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 SPAG4Q9NPE6 437 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 MED4Q9NPJ6 270 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 RASSF1Q9NS23 344 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 DONSONQ9NYP3 566 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 RRP7AQ9Y3A4 280 aaKnown RBP3.77□□□□□ -1.81
VMP1-212ENST00000591782 IKBKGQ9Y6K9 419 aa3.77□□□□□ -1.81
VMP1-212ENST00000591782 ZNF521Q96K83 1311 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ERCC6Q03468 1493 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 LY6G6EA0A0G2JKS1 128 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 A6NNC1 897 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 SOCS2O14508 198 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CHRNB1P11230 501 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CKMT1AP12532 417 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ARSAP15289 507 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 PAX7P23759 505 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CHRNA5P30532 468 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 RPS6KA3P51812 740 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 GTF2A1P52655 376 aaPredicted RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 PMPCAQ10713 525 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 BIRC3Q13489 604 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 TRIM29Q14134 588 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ENTPD8Q5MY95 495 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CBWD5Q5RIA9 395 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 PIK3CD-AS1Q5SR53 167 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 C6orf10Q5SRN2 563 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ASPHD1Q5U4P2 390 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 TTLL5Q6EMB2 1281 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 HMBOX1Q6NT76 420 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CCDC91Q7Z6B0 441 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 PCGF5Q86SE9 256 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 GALNT7Q86SF2 657 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ANKRD18AQ8IVF6 992 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 BRSK2Q8IWQ3 736 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 NGEFQ8N5V2 710 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ARFGAP1Q8N6T3 406 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 SMG7Q92540 1137 aaKnown RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 EVI5LQ96CN4 794 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 MSI2Q96DH6 328 aaKnown RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 ZNF419Q96HQ0 510 aaPredicted RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 MPP4Q96JB8 637 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 CLMNQ96JQ2 1002 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 ZNF48Q96MX3 618 aaPredicted RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 PPP1R10Q96QC0 940 aaKnown RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 TMEM79Q9BSE2 394 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 NOD2Q9HC29 1040 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 UPB1Q9UBR1 384 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 HS3ST3B1Q9Y662 390 aa3.76□□□□□ -1.81
VMP1-212ENST00000591782 DDX49Q9Y6V7 483 aaKnown RBP3.76□□□□□ -1.81
VMP1-212ENST00000591782 CACNA1IQ9P0X4 2223 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 IL16Q14005 1332 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 CCDC189A1A4V9 331 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 SAC3D1A6NKF1 404 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 C17orf100A8MU93 164 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 INO80B-WBP1J3KQ70 363 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 EIF3FO00303 357 aaPredicted RBP3.75□□□□□ -1.81
VMP1-212ENST00000591782 CCNT1O60563 726 aaKnown RBP3.75□□□□□ -1.81
VMP1-212ENST00000591782 KIAA0754O94854 1291 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 METTL18O95568 372 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 CNPP09543 421 aaKnown RBP3.75□□□□□ -1.81
VMP1-212ENST00000591782 FCGR2AP12318 317 aa3.75□□□□□ -1.81
VMP1-212ENST00000591782 HSD3B1P14060 373 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms