RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 CCDC13Q8IYE1 715 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 SLC35B2Q8TB61 432 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 C1orf54Q8WWF1 131 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 CASKIN2Q8WXE0 1202 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 ATG4AQ8WYN0 398 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 EDAQ92838 391 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 AP1M1Q9BXS5 423 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 PDFQ9HBH1 243 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 UBA2Q9UBT2 640 aaPredicted RBP20.33■□□□□ 0.85
TCF3-213ENST00000590436 ERVW-1Q9UQF0 538 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 HS3ST2Q9Y278 367 aa20.33■□□□□ 0.85
TCF3-213ENST00000590436 K7EQS6 105 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 NPC1O15118 1278 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 LIASO43766 372 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 CTSOP43234 321 aaPredicted RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 VASPP50552 380 aaPredicted RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 CLCN6P51797 869 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 BYSLQ13895 437 aaKnown RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 LRRC32Q14392 662 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 RFTN1Q14699 578 aaPredicted RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 WHAMMP3Q1A5X7 153 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 DGKKQ5KSL6 1271 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 DARS2Q6PI48 645 aaKnown RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 LINGO4Q6UY18 593 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 PRELID2Q8N945 189 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 KDM1BQ8NB78 822 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 KCNV2Q8TDN2 545 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 CYB5D2Q8WUJ1 264 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 SORCS1Q8WY21 1168 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 EZH1Q92800 747 aaPredicted RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 NKD2Q969F2 451 aaPredicted RBP20.32■□□□□ 0.84
TCF3-213ENST00000590436 TBC1D17Q9HA65 648 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 LTB4R2Q9NPC1 389 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 DNPEPQ9ULA0 475 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 SLC8A2Q9UPR5 921 aa20.32■□□□□ 0.84
TCF3-213ENST00000590436 BCLAF3A2AJT9 711 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 CFAP69A5D8W1 941 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 MATN3O15232 486 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 ALADP13716 330 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 STK19P49842 368 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 SERPINH1P50454 418 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 CCINQ13939 588 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 UBXN2BQ14CS0 331 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 FNDC3BQ53EP0 1204 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 INO80DQ53TQ3 878 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 HEATR6Q6AI08 1181 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 DRICH1Q6PGQ1 229 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 LEKR1Q6ZMV7 388 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 TRMT11Q7Z4G4 463 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 BBS5Q8N3I7 341 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 ZNF513Q8N8E2 541 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 C12orf50Q8NA57 414 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 ATP11CQ8NB49 1132 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 RPL10LQ96L21 214 aaKnown RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 HAUS2Q9NVX0 235 aa20.31■□□□□ 0.84
TCF3-213ENST00000590436 MUC22E2RYF6 1773 aaPredicted RBP20.31■□□□□ 0.84
TCF3-213ENST00000590436 PDE2AO00408 941 aaPredicted RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 PHF2O75151 1096 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 NEBLO76041 1014 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 STK10O94804 968 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 SRCP12931 536 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 HNRNPLP14866 589 aaKnown RBP eCLIP20.3■□□□□ 0.847e-8■■■■□ 21.9
TCF3-213ENST00000590436 TARSP26639 723 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 KIR2DL1P43626 348 aaPredicted RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 RENBPP51606 427 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 SEC13P55735 322 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 IFI35P80217 286 aaPredicted RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 MRPS21P82921 87 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 SNX1Q13596 522 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 HNRNPDQ14103 355 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 CYP1B1Q16678 543 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 PTPRNQ16849 979 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 MARC1Q5VT66 337 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 EGFLAMQ63HQ2 1017 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 SYNPOQ8N3V7 929 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 SH2D3CQ8N5H7 860 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 LRRN4Q8WUT4 740 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 HTR3CQ8WXA8 447 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 MAML1Q92585 1016 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 MAGOHBQ96A72 148 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 MRGPRX3Q96LB0 322 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 SEPT10Q9P0V9 454 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 THAP10Q9P2Z0 257 aaPredicted RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 SEPT3Q9UH03 358 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 ZNF148Q9UQR1 794 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 MRFAP1Q9Y605 127 aa20.3■□□□□ 0.84
TCF3-213ENST00000590436 MYO18AQ92614 2054 aaKnown RBP20.3■□□□□ 0.84
TCF3-213ENST00000590436 CCDC188H7C350 402 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 KCNK1O00180 336 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 STK25O00506 426 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 TMCC1O94876 653 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 PEX11BO96011 259 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 MT-CO1P00395 513 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 ITGAVP06756 1048 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 CCNB1P14635 433 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 VAV1P15498 845 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 RBL1P28749 1068 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 ZNF234Q14588 700 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 ZNF235Q14590 738 aa20.29■□□□□ 0.84
TCF3-213ENST00000590436 LBRQ14739 615 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms