RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 FZD4Q9ULV1 537 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 AP4E1Q9UPM8 1137 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 CKAP5Q14008 2032 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 THADAQ6YHU6 1953 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 MUC22E2RYF6 1773 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-208ENST00000589599 ATXN2Q99700 1313 aaKnown RBP17.28■□□□□ 0.36
H3F3B-208ENST00000589599 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 CXorf51AA0A1B0GTR3 108 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 A0A1W2PP55 124 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 C1QTNF3-AMACRE9PGA6 284 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 K7ERQ8 282 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 SLC30A4O14863 429 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 DAPK3O43293 454 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 AKR1B10O60218 316 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 ZMPSTE24O75844 475 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 CYP1A2P05177 515 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 SERPINF2P08697 491 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 GLDCP23378 1020 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 PCK1P35558 622 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 ACVRL1P37023 503 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 GALCP54803 685 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 TPI1P60174 286 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 IRX4P78413 519 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 GFPT1Q06210 699 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-208ENST00000589599 ZNF252P-AS1Q0IIN9 211 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 STPG1Q5TH74 334 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 DCAF12L1Q5VU92 463 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 SLC23A3Q6PIS1 610 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 ZNF354CQ86Y25 554 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 CNGA4Q8IV77 575 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 EDEM2Q9BV94 578 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 NUP85Q9BW27 656 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 CEP44Q9C0F1 390 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 MIR1-1HGQ9H1L0 117 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 NEUROG2Q9H2A3 272 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 NDFIP2Q9NV92 336 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 PPM1HQ9ULR3 514 aa17.28■□□□□ 0.36
H3F3B-208ENST00000589599 PLXND1Q9Y4D7 1925 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 LNP1A1A4G5 178 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 LRRC72A6NJI9 287 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 WASH4PA8MWX3 477 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 AKR1B15C9JRZ8 316 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 MYO1FO00160 1098 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 EEF2KO00418 725 aaKnown RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SMAD6O43541 496 aaKnown RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 MFAP3LO75121 409 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 LRCH4O75427 683 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 MAOBP27338 520 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SERPINH1P50454 418 aaKnown RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 DNA2P51530 1060 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ZNF135P52742 658 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ADKP55263 362 aaKnown RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 YBEYP58557 167 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SEMA3BQ13214 749 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SLC18A3Q16572 532 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 BOLA3Q53S33 107 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ARFGAP1Q8N6T3 406 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 SNX19Q92543 992 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 CCDC42Q96M95 316 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 C6orf106Q9H6K1 298 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-208ENST00000589599 RXFP3Q9NSD7 469 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ABHD10Q9NUJ1 306 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ANAPC7Q9UJX3 599 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 NEU3Q9UQ49 428 aa17.27■□□□□ 0.36
H3F3B-208ENST00000589599 ZSCAN5CA6NGD5 496 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 FAM47DPA6NHR8 397 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 KDELR3O43731 214 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 FSBPO95073 299 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 PRNPP04156 253 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 SYPP08247 313 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 CHRNA3P32297 505 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 ARF5P84085 180 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 PARP15Q460N3 678 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 PPP6R3Q5H9R7 873 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 C22orf39Q6P5X5 142 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 DGLUCYQ7Z3D6 616 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 AADATQ8N5Z0 425 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 PCDH20Q8N6Y1 951 aaKnown RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 OR2A12Q8NGT7 310 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 OR2T34Q8NGX1 318 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 PIP4K2CQ8TBX8 421 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 CTNNBL1Q8WYA6 563 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 SNRNP25Q9BV90 132 aaKnown RBP17.26■□□□□ 0.35
H3F3B-208ENST00000589599 TMEM9BQ9NQ34 198 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 CEP250Q9BV73 2442 aa17.26■□□□□ 0.35
H3F3B-208ENST00000589599 A0A1B0GTW7 788 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 BCAT2O15382 392 aaPredicted RBP17.25■□□□□ 0.35
H3F3B-208ENST00000589599 SLC7A4O43246 635 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 BUB1O43683 1085 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 H2AFZP0C0S5 128 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 CA9Q16790 459 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 CARD16Q5EG05 197 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 DAB2IPQ5VWQ8 1189 aa17.25■□□□□ 0.35
H3F3B-208ENST00000589599 KIAA0895LQ68EN5 471 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms