RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ALG14Q96F25 216 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 SNF8Q96H20 258 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 VAT1Q99536 393 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 GDF3Q9NR23 364 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 FAM114A2Q9NRY5 505 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
NPC1-207ENST00000588867 OR51B4Q9Y5P0 310 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 ACTL7AQ9Y615 435 aa14.8□□□□□ -0.04
NPC1-207ENST00000588867 MYO18AQ92614 2054 aaKnown RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 ANHXE9PGG2 379 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 TRIM24O15164 1050 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 ZBTB24O43167 697 aaPredicted RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 HOXC11O43248 304 aaPredicted RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 CARSP49589 748 aaKnown RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 RENBPP51606 427 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 VSNL1P62760 191 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 BASP1P80723 227 aaKnown RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 CALCOCO2Q13137 446 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 HNRNPDQ14103 355 aaKnown RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 HLTFQ14527 1009 aaKnown RBP eCLIP14.79□□□□□ -0.04
NPC1-207ENST00000588867 PLEKHG6Q3KR16 790 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 LEXMQ3ZCV2 418 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 FAXCQ5TGI0 409 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 LINGO4Q6UY18 593 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
NPC1-207ENST00000588867 SLC2A11Q9BYW1 496 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 BRD9Q9H8M2 597 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 RAB6BQ9NRW1 208 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 GGA2Q9UJY4 613 aa14.79□□□□□ -0.04
NPC1-207ENST00000588867 CACNG3O60359 315 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 OPHN1O60890 802 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 METTL18O95568 372 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 PEX11BO96011 259 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 PABPC1P11940 636 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 IVDP26440 423 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 DGKGP49619 791 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 DRG2P55039 364 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 IFI35P80217 286 aaPredicted RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 ARF5P84085 180 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 TFF2Q03403 129 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 ITKQ08881 620 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 SLC12A1Q13621 1099 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 AAK1Q2M2I8 961 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 PITRM1Q5JRX3 1037 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 SYCP2LQ5T4T6 812 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 IZUMO3Q5VZ72 239 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 C12orf40Q86WS4 652 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 MAML1Q92585 1016 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 TEKT5Q96M29 485 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 IL12RB2Q99665 862 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 C2orf49Q9BVC5 232 aaPredicted RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 PDFQ9HBH1 243 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 UBA2Q9UBT2 640 aaPredicted RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 VPS51Q9UID3 782 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 TRHDEQ9UKU6 1024 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 INTS6Q9UL03 887 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 TPX2Q9ULW0 747 aaKnown RBP14.78□□□□□ -0.04
NPC1-207ENST00000588867 TULP3O75386 442 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 ITIH2P19823 946 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 MCM3P25205 808 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 MMP13P45452 471 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 SLC6A11P48066 632 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 PLTPP55058 493 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 C4orf22Q6V702 233 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 CNTD1Q8N815 330 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 DCAF4L2Q8NA75 395 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 SEC14L1Q92503 715 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 LMLNQ96KR4 655 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 ETNK1Q9HBU6 452 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 NT5MQ9NPB1 228 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 RSPH14Q9UHP6 348 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 ANAPC5Q9UJX4 755 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 NFU1Q9UMS0 254 aa14.78□□□□□ -0.04
NPC1-207ENST00000588867 BHMG1C9JSJ3 638 aaPredicted RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 DNALI1O14645 258 aaPredicted RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 ZMPSTE24O75844 475 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 HLA-DQB2P05538 268 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 PLK1P53350 603 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ITGA8P53708 1063 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 CUL1Q13616 776 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ZNF235Q14590 738 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ITPRIPL2Q3MIP1 535 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 FUT11Q495W5 492 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 TMCO4Q5TGY1 634 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ITPRIPL1Q6GPH6 555 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 RETSATQ6NUM9 610 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 WDR93Q6P2C0 686 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 CCNI2Q6ZMN8 369 aaPredicted RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 BBOF1Q8ND07 529 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 MAFAQ8NHW3 353 aaPredicted RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 FATE1Q969F0 183 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ACDQ96AP0 544 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 ZNF419Q96HQ0 510 aaPredicted RBP14.77□□□□□ -0.04
NPC1-207ENST00000588867 ZNF599Q96NL3 588 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 KCNK12Q9HB15 430 aa14.77□□□□□ -0.04
NPC1-207ENST00000588867 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms