RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 STAP1Q9ULZ2 295 aa19.84■□□□□ 0.77
TRAF4-216ENST00000586813 CA5BQ9Y2D0 317 aa19.84■□□□□ 0.77
TRAF4-216ENST00000586813 TDRD6O60522 2096 aaKnown RBP19.83■□□□□ 0.77
TRAF4-216ENST00000586813 K7ERQ8 282 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 RNGTTO60942 597 aaKnown RBP19.83■□□□□ 0.77
TRAF4-216ENST00000586813 SDC3O75056 442 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 CKMT2P17540 419 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 TARDBPQ13148 414 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRAF4-216ENST00000586813 FAM71AQ8IYT1 594 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 DCAF4L2Q8NA75 395 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 TMEM145Q8NBT3 493 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 OR2A12Q8NGT7 310 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 NT5C3BQ969T7 300 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 PGAP3Q96FM1 320 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-216ENST00000586813 CCDC114Q96M63 670 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 DCBLD2Q96PD2 775 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 FARP1Q9Y4F1 1045 aaPredicted RBP19.83■□□□□ 0.77
TRAF4-216ENST00000586813 SNX10Q9Y5X0 201 aa19.83■□□□□ 0.77
TRAF4-216ENST00000586813 KPNA3O00505 521 aaPredicted RBP19.82■□□□□ 0.76
TRAF4-216ENST00000586813 PRLRP16471 622 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 RRM1P23921 792 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 CHRNA3P32297 505 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 RNASE9P60153 205 aaKnown RBP19.82■□□□□ 0.76
TRAF4-216ENST00000586813 MAN2A1Q16706 1144 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 NEK5Q6P3R8 708 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 SETD3Q86TU7 594 aaPredicted RBP19.82■□□□□ 0.76
TRAF4-216ENST00000586813 ARRDC3Q96B67 414 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 KLHDC7BQ96G42 594 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 CRELD1Q96HD1 420 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 MYOCQ99972 504 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 PAXBP1Q9Y5B6 917 aa19.82■□□□□ 0.76
TRAF4-216ENST00000586813 A0A0D9SEW6 157 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 A0A1W2PQU0 124 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 SLC31A1O15431 190 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 SMAD6O43541 496 aaKnown RBP19.81■□□□□ 0.76
TRAF4-216ENST00000586813 F9P00740 461 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 ACP1P24666 158 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 CDH5P33151 784 aaPredicted RBP19.81■□□□□ 0.76
TRAF4-216ENST00000586813 ABCG1P45844 678 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 CLCN6P51797 869 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 BPIFB4P59827 614 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 UBE2HP62256 183 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 DEUP1Q05D60 604 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TPD52L1Q16890 204 aaPredicted RBP19.81■□□□□ 0.76
TRAF4-216ENST00000586813 ZNF284Q2VY69 593 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 PROX2Q3B8N5 592 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 LRRC31Q6UY01 552 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 LINGO4Q6UY18 593 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TFAP2DQ7Z6R9 452 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 MLKLQ8NB16 471 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 CHST14Q8NCH0 376 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TMEM35BQ8NCS4 154 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TMIEQ8NEW7 156 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 KLK6Q92876 244 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 BBC3Q96PG8 261 aaPredicted RBP19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TBCBQ99426 244 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 NRSN2Q9GZP1 204 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 PDCL3Q9H2J4 239 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 DYRK4Q9NR20 520 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TMPRSS4Q9NRS4 437 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 MPP6Q9NZW5 540 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 TRPM6Q9BX84 2022 aa19.81■□□□□ 0.76
TRAF4-216ENST00000586813 IGLV3-10A0A075B6K4 115 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 DRGXA6NNA5 263 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 RNF103O00237 685 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 TRIM38O00635 465 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 PRNPP04156 253 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 THEGLP0DJG4 465 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 SCNN1AP37088 669 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 GABRB2P47870 512 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 SEMG2Q02383 582 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 CCDC15Q0P6D6 951 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 RTP5Q14D33 572 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 SLC25A52Q3SY17 297 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 FAM102AQ5T9C2 384 aaPredicted RBP19.8■□□□□ 0.76
TRAF4-216ENST00000586813 DPY19L2P1Q6NXN4 242 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 C22orf39Q6P5X5 142 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 HORMAD1Q86X24 394 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 SLC25A45Q8N413 288 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 GRIN3AQ8TCU5 1115 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 RFFLQ8WZ73 363 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 C1orf74Q96LT6 269 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 NDST4Q9H3R1 872 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 FZD3Q9NPG1 666 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 AK5Q9Y6K8 562 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 CHD5Q8TDI0 1954 aa19.8■□□□□ 0.76
TRAF4-216ENST00000586813 SHROOM3Q8TF72 1996 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 SIGLEC6O43699 453 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 TLX3O43711 291 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 CYP11B1P15538 503 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 HNRNPA2B1P22626 353 aaKnown RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 GLDCP23378 1020 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 OR1E1P30953 314 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 AKT2P31751 481 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 INSM1Q01101 510 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 KCNMA1Q12791 1236 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 RAPGEF1Q13905 1077 aa19.79■□□□□ 0.76
TRAF4-216ENST00000586813 DRAP1Q14919 205 aaPredicted RBP19.79■□□□□ 0.76
TRAF4-216ENST00000586813 MIIPQ5JXC2 388 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms