RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ZYG11BQ9C0D3 744 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 IL22Q9GZX6 179 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 MID2Q9UJV3 735 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TXNDC9O14530 226 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF623O75123 536 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CNTN5O94779 1100 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 RHOCP08134 193 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 SCNN1AP37088 669 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CXCR3P49682 368 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 NAGLUP54802 743 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 GSCP56915 257 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 MPP1Q00013 466 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 LZTR1Q8N653 840 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 PSMG2Q969U7 264 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 HMCESQ96FZ2 354 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TEKT5Q96M29 485 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF778Q96MU6 729 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 YME1L1Q96TA2 773 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CPNE1Q99829 537 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TTPALQ9BTX7 342 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 ATP13A1Q9HD20 1204 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TOMM70O94826 608 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 C2P06681 752 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 TSPAN8P19075 237 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC11A1P49279 550 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 KCNQ1P51787 676 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CSE1LP55060 971 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 USP4Q13107 963 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 GALNT3Q14435 633 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 EMC10Q5UCC4 262 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 NEPROQ6NW34 567 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC2A13Q96QE2 648 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 VAT1Q99536 393 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 FTHL17Q9BXU8 183 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ANLNQ9NQW6 1124 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CHKBQ9Y259 395 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 PABPN1LA6NDY0 278 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 E7ESA3 106 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 J3KR12 359 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ARVCFO00192 962 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 AIM2O14862 343 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CCDC22O60826 627 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 FYNP06241 537 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ATP5C1P36542 298 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 OXCT1P55809 520 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 GRTP1Q5TC63 336 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 RELL1Q8IUW5 271 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 SCG3Q8WXD2 468 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 NTAN1Q96AB6 310 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 OXNAD1Q96HP4 312 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 WDR83Q9BRX9 315 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 UNC93B1Q9H1C4 597 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 GBA3Q9H227 469 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 WDR6Q9NNW5 1121 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 PACSIN3Q9UKS6 424 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ZMPSTE24O75844 475 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 GFAPP14136 432 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 TSHRP16473 764 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 USP46P62068 366 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ELAVL2Q12926 359 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CLLU1OSQ5K130 101 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 BRMS1LQ5PSV4 323 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ICE2Q659A1 982 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 C6orf89Q6UWU4 347 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 CYP2S1Q96SQ9 504 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 FAM167BQ9BTA0 163 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
SMARCA4-208ENST00000585799 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PCNTO95613 3336 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 KCNU1A8MYU2 1149 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TYROBPO43914 113 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 STAMBPO95630 424 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 LPCAT1Q8NF37 534 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 NMRAL1Q9HBL8 299 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 GPAMQ9HCL2 828 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 VPS28Q9UK41 221 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 HS3ST4Q9Y661 456 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM95CA0A1B0GW59 222 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 NCF1BA6NI72 391 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 NCF1CA8MVU1 366 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms