RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GJA10	Q969M2	543 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	MYO19	Q96H55	970 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772		Q96MF0	132 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	TRIM56	Q9BRZ2	755 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	KRT23	Q9C075	422 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	CLPB	Q9H078	707 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	OLAH	Q9NV23	265 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	OCIAD1	Q9NX40	245 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	PLK2	Q9NYY3	685 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	ZBTB47	Q9UFB7	747 aa	Predicted RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	APOBEC3B	Q9UH17	382 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	AJAP1	Q9UKB5	411 aa	Predicted RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	UBQLN1	Q9UMX0	589 aa	Known RBP	5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	HS3ST3A1	Q9Y663	406 aa		5.13	□□□□□ -1.59
MSI2-216	ENST00000582772	CSMD3	Q7Z407	3707 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ABCA13	Q86UQ4	5058 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	GOLGA6L3	A6NEY3	463 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	IDS	B3KWA1	339 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ABLIM1	O14639	778 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NUDT21	O43809	227 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	KLHL41	O60662	606 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	CUTA	O60888	179 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	SIN3B	O75182	1162 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	SLCO2B1	O94956	709 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ALPP	P05187	535 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TPO	P07202	933 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	DLD	P09622	509 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PLA2G4B	P0C869	781 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	CALM1	P0DP23	149 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	CALM2	P0DP24	149 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	CALM3	P0DP25	149 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PTPN1	P18031	435 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	IDS	P22304	550 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PTGIR	P43119	386 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	COMP	P49747	757 aa	Predicted RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NDST2	P52849	883 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	B4GALNT1	Q00973	533 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	EIF2B5	Q13144	721 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	SQSTM1	Q13501	440 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	KEAP1	Q14145	624 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	LLGL1	Q15334	1064 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TMEM132A	Q24JP5	1023 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	EDRF1	Q3B7T1	1238 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PRRT3	Q5FWE3	981 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	XKR9	Q5GH70	373 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	EFHC1	Q5JVL4	640 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NT5DC1	Q5TFE4	455 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	SYVN1	Q86TM6	617 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	METTL23	Q86XA0	190 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	CDC20B	Q86Y33	519 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NRSN1	Q8IZ57	195 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	FSTL5	Q8N475	847 aa	Predicted RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	BCORP1	Q8N888	145 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TMEM102	Q8N9M5	508 aa	Predicted RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PDZD8	Q8NEN9	1154 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	OR4D9	Q8NGE8	314 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PCDH19	Q8TAB3	1148 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ADAMTS17	Q8TE56	1095 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PHF10	Q8WUB8	498 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	KCTD13	Q8WZ19	329 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TM9SF4	Q92544	642 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	WASF1	Q92558	559 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	VOPP1	Q96AW1	172 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TSPAN18	Q96SJ8	248 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	AGAP2	Q99490	1192 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ACBD6	Q9BR61	282 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NUDT22	Q9BRQ3	303 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	RNF32	Q9H0A6	362 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	POLR3F	Q9H1D9	316 aa	Predicted RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ACTL8	Q9H568	366 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	RDH14	Q9HBH5	336 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	GPAM	Q9HCL2	828 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	KMT5A	Q9NQR1	393 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	HELLS	Q9NRZ9	838 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	MARCH2	Q9P0N8	246 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	LRFN1	Q9P244	771 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	PDP2	Q9P2J9	529 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ORC3	Q9UBD5	711 aa	Predicted RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	TINAG	Q9UJW2	476 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	NOVA2	Q9UNW9	492 aa	Known RBP	5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	BTRC	Q9Y297	605 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	ROS1	P08922	2347 aa		5.12	□□□□□ -1.59
MSI2-216	ENST00000582772	FAM237B	A0A1B0GVD1	139 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	hCG_1984214	I3L0E3	225 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	PPEF2	O14830	753 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	IPO13	O94829	963 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	MCF2	P10911	925 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	BRAF	P15056	766 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	TSHR	P16473	764 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	CASP14	P31944	242 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	DEK	P35659	375 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	SOX18	P35713	384 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	GARS	P41250	739 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	GNAQ	P50148	359 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	DCAF7	P61962	342 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	POU4F1	Q01851	419 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	DMPK	Q09013	629 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	TAF10	Q12962	218 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	MYBPH	Q13203	477 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	DNASE1L3	Q13609	305 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms