RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CCDC114Q96M63 670 aa19.95■□□□□ 0.78
SREBF1-220ENST00000581707 TMEM248Q9NWD8 314 aa19.95■□□□□ 0.78
SREBF1-220ENST00000581707 PPM1HQ9ULR3 514 aa19.95■□□□□ 0.78
SREBF1-220ENST00000581707 C1QTNF3-AMACRE9PGA6 284 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 ATMINO43313 823 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 ZMPSTE24O75844 475 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 IGHV4-34P06331 123 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 ADRB1P08588 477 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 CSRP1P21291 193 aaKnown RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 L1CAMP32004 1257 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 DRD3P35462 400 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 ETFBP38117 255 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 MAPKAPK2P49137 400 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 NOVA1P51513 510 aaKnown RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 AFF3P51826 1226 aaKnown RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 OGDHQ02218 1023 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 TMC6Q7Z403 805 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 PYROXD2Q8N2H3 581 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 OR14C36Q8NHC7 312 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 PIP4K2CQ8TBX8 421 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 CPLX3Q8WVH0 158 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 SYN2Q92777 582 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 NDFIP2Q9NV92 336 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 DNAAF2Q9NVR5 837 aaKnown RBP19.94■□□□□ 0.78
SREBF1-220ENST00000581707 IFNKQ9P0W0 207 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 DNAI1Q9UI46 699 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 NEU3Q9UQ49 428 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 SLCO1B1Q9Y6L6 691 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 CHD5Q8TDI0 1954 aa19.94■□□□□ 0.78
SREBF1-220ENST00000581707 ACVRL1P37023 503 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 CSNK1EP49674 416 aaKnown RBP19.93■□□□□ 0.78
SREBF1-220ENST00000581707 METAP1P53582 386 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 ADPRHP54922 357 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 AIF1P55008 147 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 SEMA3BQ13214 749 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 N4BP2L1Q5TBK1 243 aaPredicted RBP19.93■□□□□ 0.78
SREBF1-220ENST00000581707 OR2A12Q8NGT7 310 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 IQCDQ96DY2 449 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 ACE2Q9BYF1 805 aaPredicted RBP19.93■□□□□ 0.78
SREBF1-220ENST00000581707 MAGEH1Q9H213 219 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 TM9SF3Q9HD45 589 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 OSGEPQ9NPF4 335 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 FZD10Q9ULW2 581 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 CAPN11Q9UMQ6 739 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 BZW2Q9Y6E2 419 aaKnown RBP19.93■□□□□ 0.78
SREBF1-220ENST00000581707 PCNX2A6NKB5 2137 aa19.93■□□□□ 0.78
SREBF1-220ENST00000581707 TMEM191CA6NGB0 347 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 UPK3BL1B0FP48 263 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 UPK3BL2E5RIL1 263 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 PLK4O00444 970 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 GIPC1O14908 333 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 SLC7A4O43246 635 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 CEACAM1P13688 526 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 PSMA2P25787 234 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 EPHB2P29323 1055 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 CHRNA3P32297 505 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 RECQLP46063 649 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-220ENST00000581707 SERPINH1P50454 418 aaKnown RBP19.92■□□□□ 0.78
SREBF1-220ENST00000581707 CCR5P51681 352 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 ZBED6P86452 979 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 TEAD4Q15561 434 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 POM121L1PQ3SYA9 428 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 TDRD12Q587J7 1177 aaKnown RBP19.92■□□□□ 0.78
SREBF1-220ENST00000581707 HGSNATQ68CP4 663 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 C22orf39Q6P5X5 142 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 ARHGEF2Q92974 986 aaKnown RBP19.92■□□□□ 0.78
SREBF1-220ENST00000581707 ORAI3Q9BRQ5 295 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 CEP44Q9C0F1 390 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 TNKS2Q9H2K2 1166 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
SREBF1-220ENST00000581707 HPCAL4Q9UM19 191 aa19.92■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3DA0A087WVF3 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3IA0A087WXS9 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3EA0A087X179 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3KA0A087X1G2 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 A0A1B0GVT2 93 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 A0A1W2PPC4 97 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3FA6NER0 549 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3LB9A6J9 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 RAMP2O60895 175 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 GJB3O75712 270 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 CTSLP07711 333 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3HP0C7X1 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 MYBL1P10243 752 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 ARF5P84085 180 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 BNC1Q01954 994 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 CNTN1Q12860 1018 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 SLC14A1Q13336 389 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3GQ6DHY5 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3CQ6IPX1 549 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 IL27RAQ6UWB1 636 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 PIP4P1Q86T03 277 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TBC1D3Q8IZP1 549 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-220ENST00000581707 DEFB124Q8NES8 71 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TMIEQ8NEW7 156 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 FAM131CQ96AQ9 280 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 ZNF653Q96CK0 615 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 TRIM11Q96F44 468 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 EPAS1Q99814 870 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms