RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 BTBD3Q9Y2F9 522 aa21.81■■□□□ 1.08
CSNK1D-215ENST00000580784 FLRT2O43155 660 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 RRM1P23921 792 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 SUZ12Q15022 739 aaKnown RBP21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 RAB44Q7Z6P3 723 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 GLRX5Q86SX6 157 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 SLCO6A1Q86UG4 719 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 DCAF4L2Q8NA75 395 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 BAHD1Q8TBE0 780 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 SERAC1Q96JX3 654 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 ERGIC2Q96RQ1 377 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 SPON2Q9BUD6 331 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 ZYG11BQ9C0D3 744 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 MSRB2Q9Y3D2 182 aa21.8■■□□□ 1.08
CSNK1D-215ENST00000580784 ILVBLA1L0T0 632 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 C2CD4BA6NLJ0 364 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 C1QTNF3-AMACRE9PGA6 284 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 SLC7A4O43246 635 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 LATO43561 262 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 PLRG1O43660 514 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 MBD3O95983 291 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 CTSLP07711 333 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 CD38P28907 300 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 SDC4P31431 198 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 ADRA1BP35368 520 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 NSFP46459 744 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 IL9RQ01113 521 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 CLEC16AQ2KHT3 1053 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 AGBL4Q5VU57 503 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 OR2A12Q8NGT7 310 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 MAGEB5Q9BZ81 275 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 KDM4CQ9H3R0 1056 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 ADAM22Q9P0K1 906 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 ARHGAP20Q9P2F6 1191 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 OR12D3Q9UGF7 316 aa21.79■■□□□ 1.08
CSNK1D-215ENST00000580784 WDFY3Q8IZQ1 3526 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 A0A1W2PR77 199 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 CBX4O00257 560 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 KRT3P12035 628 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 ATP1A3P13637 1013 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 MAT2AP31153 395 aaKnown RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 CHRNA3P32297 505 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 RFC1P35251 1148 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 PTPN9P43378 593 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 CCT8P50990 548 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 TYRO3Q06418 890 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 DRC7Q8IY82 874 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 AOPEPQ8N6M6 819 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 ADAMTS14Q8WXS8 1223 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 SKA1Q96BD8 255 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 TNKS2Q9H2K2 1166 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 TMEM63CQ9P1W3 806 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 PPARGC1AQ9UBK2 798 aaKnown RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 TPX2Q9ULW0 747 aaKnown RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 APOBEC2Q9Y235 224 aaKnown RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 FARP1Q9Y4F1 1045 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 PTPRBP23467 1997 aa21.78■■□□□ 1.08
CSNK1D-215ENST00000580784 FAM221BA6H8Z2 402 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 RNF103O00237 685 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 PCDHGA12O60330 932 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 DFNA5O60443 496 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 ZMPSTE24O75844 475 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 ATXN1LP0C7T5 689 aaKnown RBP21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 GNA12Q03113 381 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 ARL13BQ3SXY8 428 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 ZNF783Q6ZMS7 281 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 STRADAQ7RTN6 431 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 PRPF39Q86UA1 669 aaKnown RBP21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 PHF13Q86YI8 300 aaPredicted RBP21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 CHST14Q8NCH0 376 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 CENPIQ92674 756 aaPredicted RBP21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 CDC6Q99741 560 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 AGPAT1Q99943 283 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 ATP13A1Q9HD20 1204 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 SEPT11Q9NVA2 429 aaKnown RBP21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 CHD5Q8TDI0 1954 aa21.77■■□□□ 1.08
CSNK1D-215ENST00000580784 PLXNB3Q9ULL4 1909 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 A0A1B0GTQ1 180 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 FAM72CH0Y354 149 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 KPNA3O00505 521 aaPredicted RBP21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 ZNF821O75541 412 aaPredicted RBP21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 CLCN6P51797 869 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 HDAC4P56524 1084 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 TAS2R38P59533 333 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 FAM72AQ5TYM5 149 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 MANEALQ5VSG8 457 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 FAM72DQ6L9T8 149 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 C22orf39Q6P5X5 142 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 WDR59Q6PJI9 974 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 FAM72BQ86X60 149 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 KDF1Q8NAX2 398 aaPredicted RBP21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 TMIEQ8NEW7 156 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 FAM172AQ8WUF8 416 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 ARRDC3Q96B67 414 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 CCDC114Q96M63 670 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 ELF4Q99607 663 aaPredicted RBP21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 SELENOOQ9BVL4 669 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 OSBPL2Q9H1P3 480 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 NDFIP2Q9NV92 336 aa21.76■■□□□ 1.07
CSNK1D-215ENST00000580784 TOR4AQ9NXH8 423 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms