RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TARSP26639 723 aaKnown RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 TIE1P35590 1138 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ST8SIA6P61647 398 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 SULT2A1Q06520 285 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 IL10RBQ08334 325 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 FZD5Q13467 585 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 SLC45A4Q5BKX6 768 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 EGFLAMQ63HQ2 1017 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 TIGD7Q6NT04 549 aaPredicted RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 DARS2Q6PI48 645 aaKnown RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 LRRC49Q8IUZ0 686 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 CDKL3Q8IVW4 592 aaPredicted RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ATP11CQ8NB49 1132 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 FLCNQ8NFG4 579 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 NSMCE1Q8WV22 266 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 TTC17Q96AE7 1141 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ACDQ96AP0 544 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.43
IFT20-207ENST00000578547 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 UBA2Q9UBT2 640 aaPredicted RBP12.38□□□□□ -0.43
IFT20-207ENST00000578547 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
IFT20-207ENST00000578547 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 K7ERQ8 282 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 TIMM44O43615 452 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 RNF40O75150 1001 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 NEBLO76041 1014 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 MT-CO1P00395 513 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CHRNB1P11230 501 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 VAV1P15498 845 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CCNCP24863 283 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 RBL1P28749 1068 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 WASP42768 502 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 SERPINH1P50454 418 aaKnown RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 CLCN6P51797 869 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 XRCC4Q13426 336 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 BYSLQ13895 437 aaKnown RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 CCINQ13939 588 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 ZNF235Q14590 738 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 PRKD1Q15139 912 aaPredicted RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 ACCSLQ4AC99 568 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 TMCO4Q5TGY1 634 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CHPFQ8IZ52 775 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 ZNF513Q8N8E2 541 aaPredicted RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 PRELID2Q8N945 189 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 ERLEC1Q96DZ1 483 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 NELL2Q99435 816 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 BRD8Q9H0E9 1235 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 LMAN1LQ9HAT1 526 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 PDFQ9HBH1 243 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 SLCO3A1Q9UIG8 710 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CDC23Q9UJX2 597 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
IFT20-207ENST00000578547 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 NUP205Q92621 2012 aa12.37□□□□□ -0.43
IFT20-207ENST00000578547 SHROOM3Q8TF72 1996 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 HACD1B0YJ81 288 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 RNF103O00237 685 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 KCNN4O15554 427 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 PI15O43692 258 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 BNIP3LO60238 219 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 TMCC1O94876 653 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 SRPRAP08240 638 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 SRCP12931 536 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 NNMTP40261 264 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 CKAP4Q07065 602 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 SLC10A7Q0GE19 358 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 LRRC32Q14392 662 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 ZNF234Q14588 700 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 LBRQ14739 615 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 CCNG2Q16589 344 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 PTPRNQ16849 979 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 HEATR6Q6AI08 1181 aaKnown RBP12.36□□□□□ -0.43
IFT20-207ENST00000578547 C22orf39Q6P5X5 142 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 Q6ZS52 159 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.36□□□□□ -0.43
IFT20-207ENST00000578547 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
IFT20-207ENST00000578547 SLC35B2Q8TB61 432 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms