RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CALML6Q8TD86 181 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 GPR152Q8TDT2 470 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 USP33Q8TEY7 942 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 MZB1Q8WU39 189 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
SKA2-204ENST00000578519 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
SKA2-204ENST00000578519 CLSTN3Q9BQT9 956 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 IL23AQ9NPF7 189 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 SYBUQ9NX95 663 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 MID2Q9UJV3 735 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 ZNF510Q9Y2H8 683 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 ARL2BPQ9Y2Y0 163 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
SKA2-204ENST00000578519 STARD13Q9Y3M8 1113 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 UTRNP46939 3433 aa11.33□□□□□ -0.6
SKA2-204ENST00000578519 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 C2CD2LO14523 706 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ATP9BO43861 1147 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 SNX3O60493 162 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 GLRA3O75311 464 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 SOAT2O75908 522 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 FGBP02675 491 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 MPOP05164 745 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 GSTA1P08263 222 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ATF6P18850 670 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ADRA1DP25100 572 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 DNAJB1P25685 340 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 CRHR1P34998 444 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 CCNFP41002 786 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 GRIA1P42261 906 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 NIPAL4Q0D2K0 466 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 IFT88Q13099 833 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 MTM1Q13496 603 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZNF235Q14590 738 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 SLC14A2Q15849 920 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 PKN3Q6P5Z2 889 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 PACS1Q6VY07 963 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 KYAT3Q6YP21 454 aaKnown RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZNF783Q6ZMS7 281 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 RTL10Q7L3V2 364 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 SPATA21Q7Z572 469 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 SRLQ86TD4 932 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 MPP5Q8N3R9 675 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 BCL7CQ8WUZ0 217 aaPredicted RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 GCNAQ96QF7 691 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 KIFC1Q9BW19 673 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 MTIF3Q9H2K0 278 aaKnown RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 LSM7Q9UK45 103 aaKnown RBP11.32□□□□□ -0.6
SKA2-204ENST00000578519 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 PTPRDP23468 1912 aa11.32□□□□□ -0.6
SKA2-204ENST00000578519 HEATR9A2RTY3 570 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 CCT8L1PA6NM43 557 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 BIRC5O15392 142 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 VNN2O95498 520 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 FGF19O95750 216 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 TBX18O95935 607 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 TAC1P20366 129 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 PGFP49763 221 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 NEK3P51956 506 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 OXCT1P55809 520 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 WDR4P57081 412 aaKnown RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 SERINC3Q13530 473 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 THOC5Q13769 683 aaKnown RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 MPP2Q14168 576 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 SETDB1Q15047 1291 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 TFAP2DQ7Z6R9 452 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 SETD3Q86TU7 594 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 LMNTD2Q8IXW0 634 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 NDUFAF2Q8N183 169 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 AGGF1Q8N302 714 aaeCLIP11.31□□□□□ -0.6
SKA2-204ENST00000578519 TEX26Q8N6G2 289 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 CNTD1Q8N815 330 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 IPMKQ8NFU5 416 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 ZNF398Q8TD17 642 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 ZNF75CPQ92670 426 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 DPF3Q92784 378 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 OXNAD1Q96HP4 312 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 RANBP9Q96S59 729 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 FAM167BQ9BTA0 163 aa11.31□□□□□ -0.6
SKA2-204ENST00000578519 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
SKA2-204ENST00000578519 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms