RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CYP4F8P98187 520 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PLOD1Q02809 727 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SPIRE1Q08AE8 756 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CDH17Q12864 832 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GRM2Q14416 872 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CRY1Q16526 586 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 NFIL3Q16649 462 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CAPRIN2Q6IMN6 1127 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ENPP7Q6UWV6 458 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 COMMD2Q86X83 199 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TREML1Q86YW5 311 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SCUBE3Q8IX30 993 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TRMT2AQ8IZ69 625 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM156Q8N614 296 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKRD52Q8NB46 1076 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GPR156Q8NFN8 814 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CXorf38Q8TB03 319 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 AUTS2Q8WXX7 1259 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIB2Q92519 343 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKS1AQ92625 1134 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZBTB9Q96C00 473 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 AP2M1Q96CW1 435 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 OTUB2Q96DC9 234 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FUBP3Q96I24 572 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZBTB45Q96K62 511 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 BTBD9Q96Q07 612 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 COPS8Q99627 209 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ACO2Q99798 780 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 KXD1Q9BQD3 176 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ACBD6Q9BR61 282 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM121Q9BTD3 319 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PHACTR1Q9C0D0 580 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MRPL46Q9H2W6 279 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM124BQ9H5Z6 455 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LDAHQ9H6V9 325 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LMAN1LQ9HAT1 526 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GPATCH2LQ9NWQ4 482 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PPARGC1AQ9UBK2 798 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 C19orf25Q9UFG5 118 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CDC23Q9UJX2 597 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 AGO1Q9UL18 857 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF232Q9UNY5 417 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SHOC2Q9UQ13 582 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PADI2Q9Y2J8 665 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 YIPF1Q9Y548 306 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZFP37Q9Y6Q3 630 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A087X0T9 212 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SOWAHBA6NEL2 793 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SDR42E2A6NKP2 422 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 M0R3G1 203 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 O00370 1275 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PITPNM1O00562 1244 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CCNT2O60583 730 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SUPT7LO94864 414 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 STBD1O95210 358 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PCCBP05166 539 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 OR4Q2P0C623 313 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TFPIP10646 304 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC9A1P19634 815 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CMPK1P30085 196 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ARHGAP25P42331 645 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 GPR15P49685 360 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 IRF8Q02556 426 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 MTF1Q14872 753 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ELOCQ15369 112 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SGCBQ16585 318 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 LONRF1Q17RB8 773 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 INTS6LQ5JSJ4 861 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 C16orf46Q6P387 395 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DENND1BQ6P3S1 775 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CNSTQ6PJW8 725 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 USP53Q70EK8 1073 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 MAP4K3Q8IVH8 894 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ADSSL1Q8N142 457 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 OXR1Q8N573 874 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SPATA20Q8TB22 786 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF606Q8WXB4 792 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PLD4Q96BZ4 506 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 NRBF2Q96F24 287 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 JSRP1Q96MG2 331 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DACH2Q96NX9 599 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 KLHL5Q96PQ7 755 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PURBQ96QR8 312 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 LGMNQ99538 433 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 S100A13Q99584 98 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CAPS2Q9BXY5 557 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DPY30Q9C005 99 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 EPN3Q9H201 632 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ADAMTS10Q9H324 1103 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 NRDE2Q9H7Z3 1164 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RRAGDQ9NQL2 400 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ARL15Q9NXU5 204 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 IL1RAPL1Q9NZN1 696 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SH3BP4Q9P0V3 963 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 COPS7AQ9UBW8 275 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 FTSJ1Q9UET6 329 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SERTAD3Q9UJW9 196 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 FBXW2Q9UKT8 454 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TMCC3Q9ULS5 477 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 STK38LQ9Y2H1 464 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms