RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 FMO5P49326 533 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 CSRP3P50461 194 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 TAS2R38P59533 333 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 KRT85P78386 507 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 CDK17Q00537 523 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 XKR5Q6UX68 686 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 PRICKLE2Q7Z3G6 844 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 PTAR1Q7Z6K3 402 aaPredicted RBP13.7□□□□□ -0.22
COPS3-214ENST00000577246 CIR1Q86X95 450 aaPredicted RBP13.7□□□□□ -0.22
COPS3-214ENST00000577246 TMIEQ8NEW7 156 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 GLMNQ92990 594 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 PRMT1Q99873 361 aaKnown RBP13.7□□□□□ -0.22
COPS3-214ENST00000577246 ZSWIM1Q9BR11 485 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 C2orf49Q9BVC5 232 aaPredicted RBP13.7□□□□□ -0.22
COPS3-214ENST00000577246 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 THAP9Q9H5L6 903 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
COPS3-214ENST00000577246 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 HS3ST3A1Q9Y663 406 aa13.7□□□□□ -0.22
COPS3-214ENST00000577246 MAST4O15021 2626 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 P4HA2O15460 535 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 CHRNA3P32297 505 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 GPD2P43304 727 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
COPS3-214ENST00000577246 RABIFP47224 123 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 NUMBP49757 651 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 CLCN6P51797 869 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 SKOR1P84550 965 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 GCNT1Q02742 428 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 COBLL1Q53SF7 1204 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 FBXL22Q6P050 247 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 KYAT3Q6YP21 454 aaKnown RBP13.69□□□□□ -0.22
COPS3-214ENST00000577246 GCNT7Q6ZNI0 430 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 Q6ZSR6 202 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 PARGQ86W56 976 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 SMYD4Q8IYR2 804 aaPredicted RBP13.69□□□□□ -0.22
COPS3-214ENST00000577246 ATP11CQ8NB49 1132 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 ZNF548Q8NEK5 533 aaPredicted RBP13.69□□□□□ -0.22
COPS3-214ENST00000577246 KLK6Q92876 244 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 SNX21Q969T3 373 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 ALG14Q96F25 216 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 HDAC8Q9BY41 377 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 FZD3Q9NPG1 666 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 IPO11Q9UI26 975 aaKnown RBP13.69□□□□□ -0.22
COPS3-214ENST00000577246 SALL4Q9UJQ4 1053 aa13.69□□□□□ -0.22
COPS3-214ENST00000577246 LY6G6EA0A0G2JKS1 128 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 CPED1A4D0V7 1026 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 CSF2P04141 144 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 GLI1P08151 1106 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 NME1P15531 152 aaKnown RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 TGM2P21980 687 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 PRCPP42785 496 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 CLDN2P57739 230 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 RPS21P63220 83 aaKnown RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 NR0B2Q15466 257 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 CDKN3Q16667 212 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 ERN2Q76MJ5 926 aaKnown RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 EFL1Q7Z2Z2 1120 aaKnown RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 SLC22A18ASQ8N1D0 253 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 WDR36Q8NI36 951 aaKnown RBP13.68□□□□□ -0.22
COPS3-214ENST00000577246 BTN2A2Q8WVV5 523 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 NAT6Q93015 286 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 ATXN7L3BQ96GX2 97 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 TBC1D30Q9Y2I9 924 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 U3KQA8 63 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 ATMQ13315 3056 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 MGAQ8IWI9 3026 aa13.68□□□□□ -0.22
COPS3-214ENST00000577246 SPTY2D1-AS1A0A0U1RR47 76 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 EME2A4GXA9 379 aaPredicted RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 CDRT15L2A8MXV6 281 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 E5RJQ4 531 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 TPP1O14773 563 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 AQP9O43315 295 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 NEBLO76041 1014 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 ZNF202O95125 648 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 CTSLP07711 333 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 SRCP12931 536 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 MYF5P13349 255 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 NEK3P51956 506 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 CDH4P55283 916 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 CENPCQ03188 943 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 EIF4EBP2Q13542 120 aaPredicted RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 AUHQ13825 339 aaKnown RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 TMEM259Q4ZIN3 620 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 ZNF658Q5TYW1 1059 aaPredicted RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 KIAA1614Q5VZ46 1190 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 ANKRD40Q6AI12 368 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms