RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EPB41P11171 864 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 CEACAM1P13688 526 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 HLA-EP13747 358 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 LCP1P13796 627 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 CD19P15391 556 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 TRIM21P19474 475 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 CSRP1P21291 193 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 PRKCHP24723 683 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 RGS7P49802 495 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SGSHP51688 502 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 COG7P83436 770 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ENPEPQ07075 957 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ADIGQ0VDE8 80 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 LMAN2Q12907 356 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SEMA3BQ13214 749 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 CUL2Q13617 745 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ZNF234Q14588 700 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 DUOXA1Q1HG43 343 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 PREPLQ4J6C6 727 aaPredicted RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 RAB41Q5JT25 222 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 BSPRYQ5W0U4 402 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 TMEM215Q68D42 235 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SLC36A4Q6YBV0 504 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 UNC5AQ6ZN44 842 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ZNF276Q8N554 614 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ZNF366Q8N895 744 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ANKRD52Q8NB46 1076 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ENGASEQ8NFI3 743 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 TFAP2BQ92481 460 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 KAT5Q92993 513 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 TM9SF2Q99805 663 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ZSWIM1Q9BR11 485 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 PLCD4Q9BRC7 762 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SCNM1Q9BWG6 230 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 UBXN6Q9BZV1 441 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 CIPCQ9C0C6 399 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 MKRN2Q9H000 416 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 THAP10Q9P2Z0 257 aaPredicted RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 TSPAN16Q9UKR8 245 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SLC27A6Q9Y2P4 619 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 GOLGA6L7A0A1B0GV03 622 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 O00370 1275 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 XPO1O14980 1071 aaKnown RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 SH3BP5O60239 455 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 STX10O60499 249 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 NDUFS2O75306 463 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ZNF217O75362 1048 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CLEC3AO75596 197 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 PROS1P07225 676 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 SERPINF2P08697 491 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CD59P13987 128 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CD6P30203 668 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CHKAP35790 457 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 COPAP53621 1224 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ATXN3P54252 364 aaPredicted RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 SIM1P81133 766 aaPredicted RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 GFPT1Q06210 699 aaPredicted RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 CPSF6Q16630 551 aaKnown RBP eCLIP6.48□□□□□ -1.37
NUP88-212ENST00000576708 PLEKHG6Q3KR16 790 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 SPDYCQ5MJ68 293 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ZNF658Q5TYW1 1059 aaPredicted RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 CDKAL1Q5VV42 579 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 PM20D1Q6GTS8 502 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 UNQ6494/PRO21346Q6UXR6 183 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 PIP4P1Q86T03 277 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 TADA2BQ86TJ2 420 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 FAM124AQ86V42 546 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ARHGEF19Q8IW93 802 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ZC3H3Q8IXZ2 948 aaKnown RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 MFSD4AQ8N468 514 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 HDDC3Q8N4P3 179 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 UBR7Q8N806 425 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CEP76Q8TAP6 659 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 WFDC5Q8TCV5 224 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 CLEC4CQ8WTT0 213 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 DDI1Q8WTU0 396 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 SLC35C1Q96A29 364 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 MYEOVQ96EZ4 313 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 ZNF419Q96HQ0 510 aaPredicted RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 Q96M66 194 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 TSG101Q99816 390 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 GPR174Q9BXC1 333 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 DCLK3Q9C098 648 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 TNKS2Q9H2K2 1166 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 MTG2Q9H4K7 406 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 IL21RQ9HBE5 538 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 LRRC4Q9HBW1 653 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ITM2CQ9NQX7 267 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ELOVL2Q9NXB9 296 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 KLK13Q9UKR3 277 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 ZNF510Q9Y2H8 683 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 COQ4Q9Y3A0 265 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 SLCO1B1Q9Y6L6 691 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 PLXND1Q9Y4D7 1925 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 MYO18AQ92614 2054 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms