RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GALNT15Q8N3T1 639 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 NAT8LQ8N9F0 302 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 SENP6Q9GZR1 1112 aaPredicted RBP18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 PDGFCQ9NRA1 345 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 TRMT6Q9UJA5 497 aaKnown RBP18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 BIRC5O15392 142 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 PLA2G6O60733 806 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 H2AFYO75367 372 aaKnown RBP18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 PNPLA4P41247 253 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 VAC14Q08AM6 782 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 DLG1Q12959 904 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 TREML1Q86YW5 311 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 TRPC4APQ8TEL6 797 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 DCAKDQ8WVC6 231 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 WNT8BQ93098 351 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 CCDC126Q96EE4 140 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 FAR2Q96K12 515 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 SLC25A23Q9BV35 468 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 CDH19Q9H159 772 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 MUC3BQ9H195 1237 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 LIMD1Q9UGP4 676 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 KCNU1A8MYU2 1149 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 ZBTB11O95625 1053 aaPredicted RBP18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 CHRNGP07510 517 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 CNPY1Q3B7I2 92 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 FBXO30Q8TB52 745 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 TWNKQ96RR1 684 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 DAPK2Q9UIK4 370 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 RAP2CQ9Y3L5 183 aa18.15■□□□□ 0.5
ATPAF1-214ENST00000576409 A0A087WXM4 84 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 MFSD11O43934 449 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 SYNCRIPO60506 623 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 TADA2AO75478 443 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 HSMCR30P0CW71 290 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 GRIK4Q16099 956 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 MARC1Q5VT66 337 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 PATL1Q86TB9 770 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 FAM126BQ8IXS8 530 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 PPP1R10Q96QC0 940 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 VTI1BQ9UEU0 232 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 ZMYM5Q9UJ78 669 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 KRT8P05787 483 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 MYL4P12829 197 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 ACTR3P61158 418 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 ZNF772Q68DY9 489 aaPredicted RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 AAGABQ6PD74 315 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 CCDC103Q8IW40 242 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 GPRC5AQ8NFJ5 357 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC7A6OSQ96CW6 309 aaPredicted RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 ZNF670Q9BS34 389 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 EPB41L4BQ9H329 900 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 DHX15O43143 795 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 CLASP2O75122 1294 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 TGDSO95455 350 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 GLP2RO95838 553 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 SEMA5AQ13591 1074 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 CDHR3Q6ZTQ4 885 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 TTC30BQ8N4P2 665 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 NAT14Q8WUY8 206 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 LENG1Q96BZ8 264 aaPredicted RBP18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 PCDHGB4Q9UN71 923 aa18.14■□□□□ 0.49
ATPAF1-214ENST00000576409 TAGAPQ8N103 731 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC4A11Q8NBS3 891 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 GAD1Q99259 594 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 PTPRJQ12913 1337 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 MYOCOSA0A1B0GUC4 107 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 MAGEB16A2A368 324 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 TCEA3O75764 348 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 SNRPB2P08579 225 aaKnown RBP18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 PPM1LQ5SGD2 360 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 OTOP3Q7RTS5 596 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC44A2Q8IWA5 706 aaPredicted RBP18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 C1orf50Q9BV19 199 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 PCDHAC1Q9H158 963 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 ST6GALNAC4Q9H4F1 302 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 SCN3BQ9NY72 215 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 FBXO5Q9UKT4 447 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 NEMP2A6NFY4 417 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 LINGO3P0C6S8 592 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 S100A5P33763 92 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 PRKD1Q15139 912 aaPredicted RBP18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 PHTF2Q8N3S3 785 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 ZCCHC7Q8N3Z6 543 aaKnown RBP18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 GIPC3Q8TF64 312 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 NXNL1Q96CM4 212 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 BBS2Q9BXC9 721 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 TNFSF13BQ9Y275 285 aa18.13■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC15A5A6NIM6 579 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC2A4P14672 509 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 NPY2RP49146 381 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 IDH3AP50213 366 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 LDLRAP1Q5SW96 308 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 CCDC185Q8N715 623 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 PANX3Q96QZ0 392 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 WWOXQ9NZC7 414 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms