RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 WNT2BQ93097 391 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 NT5C3BQ969T7 300 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 SKA1Q96BD8 255 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 FAM81BQ96LP2 452 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
CDC27-217ENST00000575483 NPY6RQ99463 290 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 PIGVQ9NUD9 493 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 RWDD2AQ9UIY3 292 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 DMTF1Q9Y222 760 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
CDC27-217ENST00000575483 SYNJ2BP-COX16A0A087WUM0 186 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 CNTN5O94779 1100 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 MT-CO1P00395 513 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 C1SP09871 688 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 PNMA6AP0CW24 399 aaPredicted RBP14.28□□□□□ -0.12
CDC27-217ENST00000575483 SRCP12931 536 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 MAT2AP31153 395 aaKnown RBP14.28□□□□□ -0.12
CDC27-217ENST00000575483 CLCN1P35523 988 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 NUDT1P36639 197 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 NNMTP40261 264 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 ARRB1P49407 418 aaPredicted RBP14.28□□□□□ -0.12
CDC27-217ENST00000575483 ALFQ53S48 1182 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 GBP6Q6ZN66 633 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
CDC27-217ENST00000575483 SLC47A2Q86VL8 602 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 OXR1Q8N573 874 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 PIP4K2CQ8TBX8 421 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 ARHGEF38Q9NXL2 777 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 COX16Q9P0S2 106 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 ZNF212Q9UDV6 495 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 CA5BQ9Y2D0 317 aa14.28□□□□□ -0.12
CDC27-217ENST00000575483 ASH1LQ9NR48 2969 aaKnown RBP14.27□□□□□ -0.12
CDC27-217ENST00000575483 TENM4Q6N022 2769 aa14.27□□□□□ -0.12
CDC27-217ENST00000575483 SNAP91O60641 907 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CLDN11O75508 207 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 ADCY5O95622 1261 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CDK4P11802 303 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CDH5P33151 784 aaPredicted RBP14.27□□□□□ -0.13
CDC27-217ENST00000575483 NOS2P35228 1153 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 USP8P40818 1118 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CXCR3P49682 368 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CDH4P55283 916 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 SLC6A3Q01959 620 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 OVGP1Q12889 678 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 NME3Q13232 169 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 EXOC3L4Q17RC7 722 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 POM121L1PQ3SYA9 428 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 BNIPLQ7Z465 357 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 DSG4Q86SJ6 1040 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 PRPF39Q86UA1 669 aaKnown RBP14.27□□□□□ -0.13
CDC27-217ENST00000575483 FAM71AQ8IYT1 594 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 ANKK1Q8NFD2 765 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 OR2A12Q8NGT7 310 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 RFFLQ8WZ73 363 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 KCTD12Q96CX2 325 aaKnown RBP14.27□□□□□ -0.13
CDC27-217ENST00000575483 PGAP3Q96FM1 320 aaPredicted RBP14.27□□□□□ -0.13
CDC27-217ENST00000575483 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 PREBQ9HCU5 417 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 SLC25A13Q9UJS0 675 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 VPS28Q9UK41 221 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 SNX10Q9Y5X0 201 aa14.27□□□□□ -0.13
CDC27-217ENST00000575483 FLNBO75369 2602 aaKnown RBP14.27□□□□□ -0.13
CDC27-217ENST00000575483 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 DRGXA6NNA5 263 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 K7ERQ8 282 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 M0QYT0 321 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 TRIM38O00635 465 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 SMAD6O43541 496 aaKnown RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 TLX3O43711 291 aaPredicted RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 ZNF821O75541 412 aaPredicted RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 FGFR1OPO95684 399 aaKnown RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 GIMD1P0DJR0 217 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDC27-217ENST00000575483 MTA1Q13330 715 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 ZNF177Q13360 481 aaPredicted RBP14.26□□□□□ -0.13
CDC27-217ENST00000575483 ILKQ13418 452 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 BECN1Q14457 450 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 RTP5Q14D33 572 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 SLC45A4Q5BKX6 768 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 HES3Q5TGS1 186 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 OR6B2Q6IFH4 312 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 TRNP1Q6NT89 227 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 SLC25A45Q8N413 288 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 ARRDC3Q96B67 414 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 NXPE2Q96DL1 559 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 PLCB1Q9NQ66 1216 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 TMPRSS4Q9NRS4 437 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 VPS51Q9UID3 782 aa14.26□□□□□ -0.13
CDC27-217ENST00000575483 ZNF462Q96JM2 2506 aa14.25□□□□□ -0.13
CDC27-217ENST00000575483 A0A0D9SEW6 157 aa14.25□□□□□ -0.13
CDC27-217ENST00000575483 C1QTNF3-AMACRE9PGA6 284 aa14.25□□□□□ -0.13
CDC27-217ENST00000575483 PRAMEF26H0Y7S4 382 aa14.25□□□□□ -0.13
CDC27-217ENST00000575483 CKMT2P17540 419 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms