RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMX2-CTNND1H3BSU7 103 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 KPNA3O00505 521 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 TPP1O14773 563 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 PMM2O15305 246 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 CLDN11O75508 207 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 PCDH8O95206 1070 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 TRUB2O95900 331 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 F13A1P00488 732 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ITGA2BP08514 1039 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 NME1P15531 152 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 CCR1P32246 355 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 CHRNA3P32297 505 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 RABIFP47224 123 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 RPL34P49207 117 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 CLCN6P51797 869 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 TAS2R38P59533 333 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 YWHAZP63104 245 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 RPS21P63220 83 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 CDK17Q00537 523 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 FKBP3Q00688 224 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 DPYDQ12882 1025 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 LRMPQ12912 555 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 NR0B2Q15466 257 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 MEA1Q16626 185 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 PIP5KL1Q5T9C9 394 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 KIAA1614Q5VZ46 1190 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 KIAA1161Q6NSJ0 714 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ATG14Q6ZNE5 492 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 Q6ZVU0 165 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ERN2Q76MJ5 926 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 PTAR1Q7Z6K3 402 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 PARGQ86W56 976 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 SH2D3CQ8N5H7 860 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ZNF548Q8NEK5 533 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 CLEC4CQ8WTT0 213 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 BTN2A2Q8WVV5 523 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 NAT6Q93015 286 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ATXN7L3BQ96GX2 97 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 RPRD1AQ96P16 312 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 NT5C1BQ96P26 610 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 IL12RB2Q99665 862 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 MYOCQ99972 504 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 C2orf49Q9BVC5 232 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 ST7Q9NRC1 585 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 ARMCX3Q9UH62 379 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 ATXN7L1Q9ULK2 861 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 HS3ST2Q9Y278 367 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 U3KQA8 63 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 SHROOM3Q8TF72 1996 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 CCDC187A0A096LP49 1063 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 AQP9O43315 295 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 BNIP3LO60238 219 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 TNFSF15O95150 251 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 TGM2P21980 687 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 GPD2P43304 727 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 RECQLP46063 649 aaPredicted RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 CLDN2P57739 230 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 NFATC3Q12968 1075 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 CLN3Q13286 438 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 SGCGQ13326 291 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 CDKN3Q16667 212 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 ZSCAN23Q3MJ62 389 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 SYPL2Q5VXT5 272 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 CXorf57Q6NSI4 855 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 FBXL22Q6P050 247 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 KYAT3Q6YP21 454 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 ZNF574Q6ZN55 896 aaPredicted RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 GCNT7Q6ZNI0 430 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 USP53Q70EK8 1073 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 SLC22A18ASQ8N1D0 253 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 KLK6Q92876 244 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 ALG14Q96F25 216 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 PRMT1Q99873 361 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 SLC17A9Q9BYT1 436 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 GTPBP4Q9BZE4 634 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 MUC3BQ9H195 1237 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 FAM204AQ9H8W3 233 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 METTL14Q9HCE5 456 aaKnown RBP9.22□□□□□ -0.93
SMG6-218ENST00000575454 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 TMEM51Q9NW97 253 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 RMND1Q9NWS8 449 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 SEPT3Q9UH03 358 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 PCDHGA7Q9Y5G6 932 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 ENTPD2Q9Y5L3 495 aa9.22□□□□□ -0.93
SMG6-218ENST00000575454 COL6A6A6NMZ7 2263 aa9.21□□□□□ -0.93
SMG6-218ENST00000575454 CKAP5Q14008 2032 aa9.21□□□□□ -0.93
SMG6-218ENST00000575454 FAM237AA0A1B0GTK4 181 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 PYCARD-AS1I3L0S3 204 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 FPGTO14772 594 aa9.21□□□□□ -0.94
SMG6-218ENST00000575454 P4HA2O15460 535 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms