RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 TCERG1LQ5VWI1 586 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 SYPL2Q5VXT5 272 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 GUSBP11Q6P575 273 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 USP53Q70EK8 1073 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 CLEC14AQ86T13 490 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 CIR1Q86X95 450 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 UBR7Q8N806 425 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 ZNF548Q8NEK5 533 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 RNF34Q969K3 372 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 FEM1AQ9BSK4 669 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 STARD5Q9NSY2 213 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 ATXN7L1Q9ULK2 861 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
SMIM28-201ENST00000573100 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SMIM28-201ENST00000573100 KIF26BQ2KJY2 2108 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 RP1P56715 2156 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 EME2A4GXA9 379 aaPredicted RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 A6NNZ2 444 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 H3BM21 787 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 CSF2P04141 144 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 NME1P15531 152 aaKnown RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 CHRNA3P32297 505 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 INHBCP55103 352 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 FZD2Q14332 565 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 LINC00303Q3SY05 128 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 DCAF17Q5H9S7 520 aaPredicted RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 RABGAP1LQ5R372 815 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 TTC39BQ5VTQ0 682 aaPredicted RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 OR6B2Q6IFH4 312 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 CRTC1Q6UUV9 634 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 GCNT7Q6ZNI0 430 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 BEND5Q7L4P6 421 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 PTAR1Q7Z6K3 402 aaPredicted RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 ALG14Q96F25 216 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 BMFQ96LC9 184 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 IL12RB2Q99665 862 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 DYRK4Q9NR20 520 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 ST7Q9NRC1 585 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
SMIM28-201ENST00000573100 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 RCOR1Q9UKL0 485 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
SMIM28-201ENST00000573100 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 RNF225M0QZC1 329 aaPredicted RBP12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SUV39H1O43463 412 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
SMIM28-201ENST00000573100 NTRK1P04629 796 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 ITGB2P05107 769 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 CTSLP07711 333 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 ITGA2BP08514 1039 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SFTPCP11686 197 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 PFKFB1P16118 471 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 CMA1P23946 247 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
SMIM28-201ENST00000573100 RPIAP49247 311 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 NFKB2Q00653 900 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 NR0B2Q15466 257 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 FBXL22Q6P050 247 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SH2D3CQ8N5H7 860 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 WDR48Q8TAF3 677 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 CCDC114Q96M63 670 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 SLC17A9Q9BYT1 436 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 ZFR2Q9UPR6 939 aaKnown RBP12.58□□□□□ -0.4
SMIM28-201ENST00000573100 UNC79Q9P2D8 2635 aa12.58□□□□□ -0.4
SMIM28-201ENST00000573100 POM121BA6NF01 834 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 TPP1O14773 563 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 MUSKO15146 869 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 AQP9O43315 295 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 PAK4O96013 591 aaPredicted RBP12.57□□□□□ -0.4
SMIM28-201ENST00000573100 MT-CO1P00395 513 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 PRNPP04156 253 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 SLC2A3P11169 496 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 JUNDP17535 347 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 ITGB6P18564 788 aa12.57□□□□□ -0.4
SMIM28-201ENST00000573100 RPL34P49207 117 aaKnown RBP12.57□□□□□ -0.4
SMIM28-201ENST00000573100 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms