RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 TM6SF2Q9BZW4 377 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 LACRTQ9GZZ8 138 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 DEF6Q9H4E7 631 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 ZNHIT6Q9NWK9 470 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 SUN2Q9UH99 717 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 PCDHA13Q9Y5I0 950 aa10.03□□□□□ -0.8
GTF3C1-212ENST00000570129 EDDM13A0A1B0GTR0 161 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 BCLAF3A2AJT9 711 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 MUSKO15146 869 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 RNF8O76064 485 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 EPN2O95208 641 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 MOCS3O95396 460 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 IL1BP01584 269 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 RETP07949 1114 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 TMEM253P0C7T8 217 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 FECHP22830 423 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CNR2P34972 360 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 DRD3P35462 400 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 ETFBP38117 255 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 MAGEA1P43355 309 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 MARCKSL1P49006 195 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 TPI1P60174 286 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 ST8SIA6P61647 398 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 IRX4P78413 519 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 BNC1Q01954 994 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SEMG2Q02383 582 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CNTN1Q12860 1018 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SLC12A1Q13621 1099 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 IHHQ14623 411 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 POLD3Q15054 466 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 PTPRRQ15256 657 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CST6Q15828 149 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 ARSIQ5FYB1 569 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 AFMIDQ63HM1 303 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 LAIR1Q6GTX8 287 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 POLNQ7Z5Q5 900 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SETD3Q86TU7 594 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CNGA4Q8IV77 575 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 GRIN3AQ8TCU5 1115 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 GANCQ8TET4 914 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 KLK6Q92876 244 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 EXOC2Q96KP1 924 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 HSPA12BQ96MM6 686 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CSPG4P5Q96PW8 444 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 PABPC3Q9H361 631 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SEMA4AQ9H3S1 761 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 MRPL47Q9HD33 250 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 FBXL12Q9NXK8 326 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 IP6K2Q9UHH9 426 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 HS3ST2Q9Y278 367 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 CA5BQ9Y2D0 317 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 PAXBP1Q9Y5B6 917 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 SCINQ9Y6U3 715 aa10.02□□□□□ -0.81
GTF3C1-212ENST00000570129 KNL1Q8NG31 2342 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 WASH4PA8MWX3 477 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 MYO1FO00160 1098 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 KCNK3O14649 394 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 BUB1O43683 1085 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 KDELR3O43731 214 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 RAMP2O60895 175 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 CD6P30203 668 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PCK1P35558 622 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 MPLP40238 635 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 OXCT1P55809 520 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 TAS2R38P59533 333 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 SLC10A2Q12908 348 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 SERINC3Q13530 473 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PIGHQ14442 188 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 ZNF776Q68DI1 518 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 C22orf39Q6P5X5 142 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 UMODL1-AS1Q8N2C9 162 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 NIPA2Q8N8Q9 360 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 DCAF4L2Q8NA75 395 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PCDH19Q8TAB3 1148 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PIP4K2CQ8TBX8 421 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 CTNNBL1Q8WYA6 563 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 SMIM14Q96QK8 99 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 PANX2Q96RD6 677 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 ORAI3Q9BRQ5 295 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 LHX3Q9UBR4 397 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 GGT7Q9UJ14 662 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 SLC25A13Q9UJS0 675 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 RAB23Q9ULC3 237 aa10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 EPN1Q9Y6I3 576 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-212ENST00000570129 WASF2Q9Y6W5 498 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms