RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 FAM153BP0C7A2 387 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 VPS41P49754 854 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 GAD2Q05329 585 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 SLC10A7Q0GE19 358 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 GPS1Q13098 491 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 HNRNPDQ14103 355 aaKnown RBP10.56□□□□□ -0.72
CDH11-214ENST00000568340 PPP1R7Q15435 360 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 FAM153CQ494X1 144 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 TEX44Q53QW1 395 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 TMEM215Q68D42 235 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 TPGS1Q6ZTW0 290 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 ADIPOR2Q86V24 386 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 APCDD1Q8J025 514 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 AGGF1Q8N302 714 aaeCLIP10.56□□□□□ -0.72
CDH11-214ENST00000568340 ST13P5Q8NFI4 369 aaPredicted RBP10.56□□□□□ -0.72
CDH11-214ENST00000568340 ARRDC2Q8TBH0 407 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 CCHCR1Q8TD31 782 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 RSAD2Q8WXG1 361 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 SNF8Q96H20 258 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 OXNAD1Q96HP4 312 aaPredicted RBP10.56□□□□□ -0.72
CDH11-214ENST00000568340 ZNF599Q96NL3 588 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 VAT1Q99536 393 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 KXD1Q9BQD3 176 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 MGME1Q9BQP7 344 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 FAM129AQ9BZQ8 928 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 TRIM31Q9BZY9 425 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 DUS2Q9NX74 493 aaKnown RBP10.56□□□□□ -0.72
CDH11-214ENST00000568340 PLK2Q9NYY3 685 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 PAK5Q9P286 719 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 LHX3Q9UBR4 397 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 ASIC3Q9UHC3 531 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 FAM153AQ9UHL3 310 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 SHOC2Q9UQ13 582 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 UTP11Q9Y3A2 253 aaKnown RBP10.56□□□□□ -0.72
CDH11-214ENST00000568340 NUP205Q92621 2012 aa10.56□□□□□ -0.72
CDH11-214ENST00000568340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 C2CD4DB7Z1M9 353 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 TRIM24O15164 1050 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 ZNF821O75541 412 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 TUBBP07437 444 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 CCNB1P14635 433 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 TYRP14679 529 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 PSMB4P28070 264 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 RGRP47804 291 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 ITGA8P53708 1063 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 AP1B1Q10567 949 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 ZNF177Q13360 481 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 MORF4L2Q15014 288 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 BRD3Q15059 726 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 PDGFRLQ15198 375 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 PLEKHG6Q3KR16 790 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 BEND6Q5SZJ8 279 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 FAXCQ5TGI0 409 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 TMCO4Q5TGY1 634 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 IZUMO3Q5VZ72 239 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 RNF219Q5W0B1 726 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 NAIF1Q69YI7 327 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 TIGD7Q6NT04 549 aaPredicted RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 HOOK3Q86VS8 718 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 IFT20Q8IY31 132 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 HNRNPLLQ8WVV9 542 aaKnown RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 CAVIN3Q969G5 261 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 E2F7Q96AV8 911 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 MYO19Q96H55 970 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 FCRL5Q96RD9 977 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 PHACTR1Q9C0D0 580 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 PLAC1Q9HBJ0 212 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 ETNK1Q9HBU6 452 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 EIF2B3Q9NR50 452 aaKnown RBP10.55□□□□□ -0.72
CDH11-214ENST00000568340 FAM114A2Q9NRY5 505 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 VPS51Q9UID3 782 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 NFU1Q9UMS0 254 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 SLC27A6Q9Y2P4 619 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 NUMBLQ9Y6R0 609 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 C5orf42Q9H799 3197 aa10.55□□□□□ -0.72
CDH11-214ENST00000568340 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 E7ESA3 106 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 NEDD8-MDP1E9PL57 170 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 DYNC1I1O14576 645 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 CHADO15335 359 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 GJB3O75712 270 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 SUN1O94901 812 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 JCHAINP01591 159 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 ADH5P11766 374 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 ITIH2P19823 946 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 NFKB1P19838 968 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 TPSB2P20231 275 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 KCNA5P22460 613 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 ADRA1AP35348 466 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 ETFBP38117 255 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 OPRD1P41143 372 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
CDH11-214ENST00000568340 NIPAL4Q0D2K0 466 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 CDH18Q13634 790 aa10.54□□□□□ -0.72
CDH11-214ENST00000568340 GRM2Q14416 872 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms