RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 CBX4O00257 560 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 MCF2LO15068 1137 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 SMAD6O43541 496 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 RNASEH2AO75792 299 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 GOT1P17174 413 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 CASP14P31944 242 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 SERPINH1P50454 418 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 SPECC1LQ69YQ0 1117 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 RETSATQ6NUM9 610 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 C22orf39Q6P5X5 142 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 LINGO4Q6UY18 593 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 ZCCHC9Q8N567 271 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 ARFGAP1Q8N6T3 406 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 RTL3Q8N8U3 475 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 GANCQ8TET4 914 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 EPAS1Q99814 870 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 OMDQ99983 421 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 SPON2Q9BUD6 331 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 NEUROG2Q9H2A3 272 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 MRPL47Q9HD33 250 aaKnown RBP17.5■□□□□ 0.39
KNOP1-205ENST00000568230 DNAI1Q9UI46 699 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 SARDHQ9UL12 918 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 PPM1HQ9ULR3 514 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 ADAMTS9Q9P2N4 1935 aa17.5■□□□□ 0.39
KNOP1-205ENST00000568230 A0A087X0T9 212 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 A0A1B0GTW7 788 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
KNOP1-205ENST00000568230 RAMP2O60895 175 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 FAM228BP0C875 321 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 EPHB2P29323 1055 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 HTR7P34969 479 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 DRD3P35462 400 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 ACVRL1P37023 503 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 ADPRHP54922 357 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 SLC20A2Q08357 652 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 TRIM14Q14142 442 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 FAM46CQ5VWP2 391 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 OR2A12Q8NGT7 310 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 ARHGEF2Q92974 986 aaKnown RBP17.49■□□□□ 0.39
KNOP1-205ENST00000568230 BIRC7Q96CA5 298 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 CCDC114Q96M63 670 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
KNOP1-205ENST00000568230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
KNOP1-205ENST00000568230 CEP44Q9C0F1 390 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 MAGEH1Q9H213 219 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 FSCN3Q9NQT6 498 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 ARHGAP20Q9P2F6 1191 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 EIF2B4Q9UI10 523 aaKnown RBP17.49■□□□□ 0.39
KNOP1-205ENST00000568230 NENFQ9UMX5 172 aa17.49■□□□□ 0.39
KNOP1-205ENST00000568230 C1QTNF3-AMACRE9PGA6 284 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 ARHGAP33O14559 1287 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 BCAT2O15382 392 aaPredicted RBP17.48■□□□□ 0.39
KNOP1-205ENST00000568230 ZNF821O75541 412 aaPredicted RBP17.48■□□□□ 0.39
KNOP1-205ENST00000568230 IGHV4-34P06331 123 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 MAPK8P45983 427 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 METAP1P53582 386 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 GALCP54803 685 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 DAB2IPQ5VWQ8 1189 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 KIAA0895LQ68EN5 471 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 CYP4V2Q6ZWL3 525 aaPredicted RBP17.48■□□□□ 0.39
KNOP1-205ENST00000568230 VSTM4Q8IW00 320 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 OR2T34Q8NGX1 318 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 PEBP4Q96S96 227 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 DNAJC7Q99615 494 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 ORAI3Q9BRQ5 295 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 MIR1-1HGQ9H1L0 117 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 NOL6Q9H6R4 1146 aaKnown RBP17.48■□□□□ 0.39
KNOP1-205ENST00000568230 OSGEPQ9NPF4 335 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 SLCO1B1Q9Y6L6 691 aa17.48■□□□□ 0.39
KNOP1-205ENST00000568230 LRRC72A6NJI9 287 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 WASH4PA8MWX3 477 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 FGF10O15520 208 aaPredicted RBP17.47■□□□□ 0.39
KNOP1-205ENST00000568230 SLC7A4O43246 635 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CREB3O43889 395 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 LRCH4O75427 683 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CD160O95971 181 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CTSLP07711 333 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 SYPP08247 313 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CD27P26842 260 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 MIPP30301 263 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 GRIK2Q13002 908 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 PSTKQ8IV42 348 aaKnown RBP17.47■□□□□ 0.39
KNOP1-205ENST00000568230 PCDH20Q8N6Y1 951 aaKnown RBP17.47■□□□□ 0.39
KNOP1-205ENST00000568230 PIP4K2CQ8TBX8 421 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 SNX19Q92543 992 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 NCAPGQ9BPX3 1015 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 SNRNP25Q9BV90 132 aaKnown RBP17.47■□□□□ 0.39
KNOP1-205ENST00000568230 ZDHHC5Q9C0B5 715 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 GPATCH2LQ9NWQ4 482 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 MYO1AQ9UBC5 1043 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CHD8Q9HCK8 2581 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 CABIN1Q9Y6J0 2220 aa17.47■□□□□ 0.39
KNOP1-205ENST00000568230 MED19A0JLT2 244 aaPredicted RBP17.47■□□□□ 0.39
KNOP1-205ENST00000568230 BNIP3LO60238 219 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms