RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 TMEM8AQ9HCN3 771 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 ZNF214Q9UL59 606 aaPredicted RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 NEU2Q9Y3R4 380 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 FAM208AQ9UK61 1670 aaKnown RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 H3BUI4 141 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 RAD51BO15315 384 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 KATNA1O75449 491 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 SUPT7LO94864 414 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 ATP6V1G2O95670 118 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 GYPCP04921 128 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 GNSP15586 552 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 TKTP29401 623 aaKnown RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 NOVP48745 357 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 MYBPC1Q00872 1141 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 C11orf63Q6NUN7 778 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 AAGABQ6PD74 315 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 BNIPLQ7Z465 357 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 MTFMTQ96DP5 389 aaKnown RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 SLC24A3Q9HC58 644 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 RBPJLQ9UBG7 517 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 OR10H1Q9Y4A9 318 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 ANKDD1BA6NHY2 528 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 C1QTNF3-AMACRE9PGA6 284 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 GCATO75600 419 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 NMT1P30419 496 aaKnown RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 ARL3P36405 182 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 CDH8P55286 799 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 NFE2Q16621 373 aaPredicted RBP6.32□□□□□ -1.4
CDH13-209ENST00000567109 ZIM3Q96PE6 472 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 TMEM109Q9BVC6 243 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 ACTR8Q9H981 624 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 SMPD4Q9NXE4 827 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 DLGAP2Q9P1A6 1054 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 GRID1Q9ULK0 1009 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 WDR37Q9Y2I8 494 aa6.32□□□□□ -1.4
CDH13-209ENST00000567109 H3BN98 237 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 LSM1O15116 133 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 KHDRBS3O75525 346 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 PDE5AO76074 875 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 KRT6AP02538 564 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 KRT6BP04259 564 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 LYNP07948 512 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ALPPL2P10696 532 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 NFKB1P19838 968 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ADORA2AP29274 412 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 BCL2L1Q07817 233 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 MCL1Q07820 350 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PUS10Q3MIT2 529 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 TRIQKQ629K1 86 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 RNF43Q68DV7 783 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CASP12Q6UXS9 341 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 DENND5BQ6ZUT9 1274 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ACOT1Q86TX2 421 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 MINDY2Q8NBR6 621 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 SLC35G2Q8TBE7 412 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PI4K2AQ9BTU6 479 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CHKBQ9Y259 395 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 SLC27A6Q9Y2P4 619 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PARP4Q9UKK3 1724 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 RBAK-RBAKDNI3L0D1 243 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PEX14O75381 377 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PAX3P23760 479 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 RRM1P23921 792 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 NME5P56597 212 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CCDC153Q494R4 210 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 DUSP28Q4G0W2 176 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 GPAT3Q53EU6 434 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 AKIRIN2Q53H80 203 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 FGD3Q5JSP0 725 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 GET4Q7L5D6 327 aaPredicted RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 TFAP2DQ7Z6R9 452 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PACS2Q86VP3 889 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 SLC13A5Q86YT5 568 aaPredicted RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 RAD54BQ9Y620 910 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ZNF780BQ9Y6R6 833 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CYP3A7-CYP3A51PA0A087WV96 503 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 MOXD2PA6NHM9 499 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 H3BNH8 94 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CCNT2O60583 730 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 CLPTM1O96005 669 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 TYMPP19971 482 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 CYP3A7P24462 503 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 RPA3P35244 121 aaPredicted RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 SLC34A1Q06495 639 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ACVR2BQ13705 512 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ZSWIM7Q19AV6 140 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 ADGRG2Q8IZP9 1017 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 GALNT15Q8N3T1 639 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 GRIN3AQ8TCU5 1115 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 PPP1R10Q96QC0 940 aaKnown RBP6.31□□□□□ -1.4
CDH13-209ENST00000567109 CYLDQ9NQC7 956 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 VPS45Q9NRW7 570 aa6.31□□□□□ -1.4
CDH13-209ENST00000567109 UBQLN1Q9UMX0 589 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms