RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MAT2AP31153 395 aaKnown RBP15.35■□□□□ 0.05
RNF40-209ENST00000566703 GGCXP38435 758 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 NUMBP49757 651 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 TAS2R38P59533 333 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 COL28A1Q2UY09 1125 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 PIP5KL1Q5T9C9 394 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 BNIPLQ7Z465 357 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 PDZD3Q86UT5 571 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 MARCH9Q86YJ5 346 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 MSANTD4Q8NCY6 345 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 RETREG1Q9H6L5 497 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 PLCB1Q9NQ66 1216 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 DYRK4Q9NR20 520 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 KLHL11Q9NVR0 708 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 PLXNA2O75051 1894 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 CHD6Q8TD26 2715 aa15.35■□□□□ 0.05
RNF40-209ENST00000566703 I6L893 689 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 BNIP3LO60238 219 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 SNAP91O60641 907 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 ENDOD1O94919 500 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 CTSLP07711 333 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 PNMA6AP0CW24 399 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 TFE3P19532 575 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 OR1E1P30953 314 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 RECQLP46063 649 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 DNAJC3Q13217 504 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 ZNF211Q13398 564 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 RAPGEF1Q13905 1077 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 FAM102AQ5T9C2 384 aaPredicted RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 RETSATQ6NUM9 610 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 FBXL19Q6PCT2 694 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 HORMAD1Q86X24 394 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 XYLT1Q86Y38 959 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 TMEM145Q8NBT3 493 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 HNRNPLLQ8WVV9 542 aaKnown RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 TBCBQ99426 244 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 NAA15Q9BXJ9 866 aaKnown RBP15.34■□□□□ 0.05
RNF40-209ENST00000566703 HDAC8Q9BY41 377 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 STK33Q9BYT3 514 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 CEP44Q9C0F1 390 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 NRSN2Q9GZP1 204 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 TMEM59LQ9UK28 342 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 ZFHX4Q86UP3 3567 aa15.34■□□□□ 0.05
RNF40-209ENST00000566703 A0A0D9SEW6 157 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 A0A1W2PQU0 124 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 K7ERQ8 282 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 CBX4O00257 560 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 KPNA3O00505 521 aaPredicted RBP15.33■□□□□ 0.04
RNF40-209ENST00000566703 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
RNF40-209ENST00000566703 UCHL3P15374 230 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 RRM1P23921 792 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 ACP1P24666 158 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 AKT2P31751 481 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 E2F1Q01094 437 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 RTP5Q14D33 572 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 ZNF284Q2VY69 593 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 POM121L1PQ3SYA9 428 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 ARTNQ5T4W7 220 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 ERN2Q76MJ5 926 aaKnown RBP15.33■□□□□ 0.04
RNF40-209ENST00000566703 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 ZNF677Q86XU0 584 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 DCP2Q8IU60 420 aaKnown RBP15.33■□□□□ 0.04
RNF40-209ENST00000566703 PLPP6Q8IY26 295 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 RFFLQ8WZ73 363 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 NXPE2Q96DL1 559 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 IFT43Q96FT9 208 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 PPP1R16AQ96I34 528 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 MPP6Q9NZW5 540 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 PPARGC1AQ9UBK2 798 aaKnown RBP15.33■□□□□ 0.04
RNF40-209ENST00000566703 FHOD1Q9Y613 1164 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 CACNA1GO43497 2377 aa15.33■□□□□ 0.04
RNF40-209ENST00000566703 SLC31A1O15431 190 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ZMPSTE24O75844 475 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 HNRNPA2B1P22626 353 aaKnown RBP15.32■□□□□ 0.04
RNF40-209ENST00000566703 FLT3P36888 993 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 TARDBPQ13148 414 aaKnown RBP eCLIP15.32■□□□□ 0.04
RNF40-209ENST00000566703 COL9A2Q14055 689 aaPredicted RBP15.32■□□□□ 0.04
RNF40-209ENST00000566703 PROX2Q3B8N5 592 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 DPCR1Q3MIW9 517 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ARSIQ5FYB1 569 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 C22orf39Q6P5X5 142 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 SLC25A45Q8N413 288 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 PCDH20Q8N6Y1 951 aaKnown RBP15.32■□□□□ 0.04
RNF40-209ENST00000566703 CHST14Q8NCH0 376 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ARRDC3Q96B67 414 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ZYG11BQ9C0D3 744 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ZNF212Q9UDV6 495 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 IL36AQ9UHA7 158 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 HS3ST3A1Q9Y663 406 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 ADAMTS20P59510 1910 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 AKAP13Q12802 2813 aa15.32■□□□□ 0.04
RNF40-209ENST00000566703 KNTC1P50748 2209 aa15.31■□□□□ 0.04
RNF40-209ENST00000566703 SRGAP2O75044 1071 aa15.31■□□□□ 0.04
RNF40-209ENST00000566703 ZNF821O75541 412 aaPredicted RBP15.31■□□□□ 0.04
RNF40-209ENST00000566703 THEGLP0DJG4 465 aa15.31■□□□□ 0.04
RNF40-209ENST00000566703 EEF1GP26641 437 aaKnown RBP15.31■□□□□ 0.04
RNF40-209ENST00000566703 ETFBP38117 255 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms