RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 VPS28Q9UK41 221 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 GPSM3Q9Y4H4 160 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 NYNRINQ9P2P1 1898 aaKnown RBP18.97■□□□□ 0.63
CLN6-204ENST00000564752 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 I6L893 689 aaPredicted RBP18.96■□□□□ 0.63
CLN6-204ENST00000564752 YKT6O15498 198 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 CNTN5O94779 1100 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 ITGAVP06756 1048 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 ATP1A3P13637 1013 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 TFE3P19532 575 aaPredicted RBP18.96■□□□□ 0.63
CLN6-204ENST00000564752 FMO1Q01740 532 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 CNTN1Q12860 1018 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 CAMK2BQ13554 666 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 BRMS1LQ5PSV4 323 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 NAPEPLDQ6IQ20 393 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 Q6ZVU0 165 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
CLN6-204ENST00000564752 PRPF39Q86UA1 669 aaKnown RBP18.96■□□□□ 0.63
CLN6-204ENST00000564752 ZNF683Q8IZ20 524 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 SH2D3CQ8N5H7 860 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 MFSD2AQ8NA29 543 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 PIP4K2CQ8TBX8 421 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 PGAP3Q96FM1 320 aaPredicted RBP18.96■□□□□ 0.63
CLN6-204ENST00000564752 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 ERVMER34-1Q9H9K5 563 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 DKK4Q9UBT3 224 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 PAXBP1Q9Y5B6 917 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 ITPR1Q14643 2758 aa18.96■□□□□ 0.63
CLN6-204ENST00000564752 APC2O95996 2303 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 TRABD2BA6NFA1 517 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 DRGXA6NNA5 263 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 SMTNL1A8MU46 457 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 C1QTNF3-AMACRE9PGA6 284 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 F9P00740 461 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 CYP1A1P04798 512 aaPredicted RBP18.95■□□□□ 0.62
CLN6-204ENST00000564752 NUDT1P36639 197 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 RXRGP48443 463 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 ARRB1P49407 418 aaPredicted RBP18.95■□□□□ 0.62
CLN6-204ENST00000564752 DEUP1Q05D60 604 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 SLC25A52Q3SY17 297 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 ALFQ53S48 1182 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 CCDC157Q569K6 752 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 DHRS13Q6UX07 377 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 TRIM69Q86WT6 500 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 C1orf74Q96LT6 269 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 TBCBQ99426 244 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 PSMB7Q99436 277 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 MUC3BQ9H195 1237 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 TMEM51Q9NW97 253 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 HS3ST2Q9Y278 367 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 PCDHGA1Q9Y5H4 931 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 PTPRBP23467 1997 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 ACACAQ13085 2346 aa18.95■□□□□ 0.62
CLN6-204ENST00000564752 TMEM131Q92545 1883 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 GOLGA4Q13439 2230 aaKnown RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 FAM149AA5PLN7 773 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 ENC1O14682 589 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 LDOC1O95751 146 aaPredicted RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 MT-CO1P00395 513 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 SRCP12931 536 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 CHRNB2P17787 502 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 EPHA8P29322 1005 aaPredicted RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 MAT2AP31153 395 aaKnown RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 FLT3P36888 993 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 KRT83P78385 493 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 BNIP3Q12983 259 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 POM121L1PQ3SYA9 428 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 IQCHQ86VS3 1027 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 SPATS2Q86XZ4 545 aaKnown RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 CNDP2Q96KP4 475 aaKnown RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 C11orf70Q9BRQ4 267 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 METTL5Q9NRN9 209 aaKnown RBP18.94■□□□□ 0.62
CLN6-204ENST00000564752 DMTF1Q9Y222 760 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 SNX10Q9Y5X0 201 aa18.94■□□□□ 0.62
CLN6-204ENST00000564752 PLXNA2O75051 1894 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 CBX4O00257 560 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 SNAP91O60641 907 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 RHOCP08134 193 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 MMP8P22894 467 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 OVGP1Q12889 678 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 ACBD5Q5T8D3 534 aaPredicted RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 C19orf48Q6RUI8 117 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 SETD3Q86TU7 594 aaPredicted RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 TMPRSS12Q86WS5 348 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 OXR1Q8N573 874 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 EID2Q8N6I1 236 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 PDCD7Q8N8D1 485 aaKnown RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 ATP11CQ8NB49 1132 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 OR2A12Q8NGT7 310 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 C2orf49Q9BVC5 232 aaPredicted RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 SEPT11Q9NVA2 429 aaKnown RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 VPS51Q9UID3 782 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 TMEM59LQ9UK28 342 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 RAXQ9Y2V3 346 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 FARP1Q9Y4F1 1045 aaPredicted RBP18.93■□□□□ 0.62
CLN6-204ENST00000564752 KNTC1P50748 2209 aa18.93■□□□□ 0.62
CLN6-204ENST00000564752 K7ERQ8 282 aa18.92■□□□□ 0.62
CLN6-204ENST00000564752 BNIP3LO60238 219 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms