RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
COTL1-202ENST00000561707 GTSE1Q9NYZ3 720 aa13.1□□□□□ -0.31
COTL1-202ENST00000561707 GRHL1Q9NZI5 618 aa13.1□□□□□ -0.31
COTL1-202ENST00000561707 LAMA3Q16787 3333 aa13.1□□□□□ -0.31
COTL1-202ENST00000561707 CHADO15335 359 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 HOXC11O43248 304 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 CD160O95971 181 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 ADH1CP00326 375 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 DRG2P55039 364 aaKnown RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 IFI35P80217 286 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 CYTH1Q15438 398 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 P3H1Q32P28 736 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 IZUMO3Q5VZ72 239 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 CCNI2Q6ZMN8 369 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 MTSS1LQ765P7 747 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 PGBD5Q8N414 524 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 SEC14L1Q92503 715 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 ATP2A3Q93084 1043 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 ZNF419Q96HQ0 510 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 NEUROG2Q9H2A3 272 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 NT5MQ9NPB1 228 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 PAK5Q9P286 719 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
COTL1-202ENST00000561707 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 FBXO10Q9UK96 956 aa13.09□□□□□ -0.31
COTL1-202ENST00000561707 TCRBV7S3A2A0A539 114 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 MTSS1O43312 755 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TULP3O75386 442 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 STK10O94804 968 aaKnown RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 MT-CO1P00395 513 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 MYBL2P10244 700 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 PABPC1P11940 636 aaKnown RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 PLK1P53350 603 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 ITGA8P53708 1063 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 ARF5P84085 180 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 MESP2Q0VG99 397 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 PLEKHG6Q3KR16 790 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 FUT11Q495W5 492 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 ZDHHC24Q6UX98 284 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 TEX26Q8N6G2 289 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 LRRC45Q96CN5 670 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TEKT5Q96M29 485 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 RAB6BQ9NRW1 208 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 ANAPC5Q9UJX4 755 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TPX2Q9ULW0 747 aaKnown RBP13.08□□□□□ -0.32
COTL1-202ENST00000561707 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
COTL1-202ENST00000561707 TICRRQ7Z2Z1 1910 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
COTL1-202ENST00000561707 K7ERQ8 282 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 MUSKO15146 869 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 TP73O15350 636 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 CACNG3O60359 315 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ASGR2P07307 311 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 IL9P15248 144 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ITIH2P19823 946 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 NFKB1P19838 968 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 PSMB4P28070 264 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 GJA4P35212 333 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ACTN2P35609 894 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 MMP13P45452 471 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 SOX9P48436 509 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 RENBPP51606 427 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 PLTPP55058 493 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 MAXP61244 160 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 NR1H3Q13133 447 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
COTL1-202ENST00000561707 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
COTL1-202ENST00000561707 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 TMEM215Q68D42 235 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ADIPOR2Q86V24 386 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
COTL1-202ENST00000561707 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms