RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 FAM174AQ8TBP5 190 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 C2orf49Q9BVC5 232 aaPredicted RBP12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 COX16Q9P0S2 106 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 BNIP3LO60238 219 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 PIAS2O75928 621 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 MT-CO1P00395 513 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 PRNPP04156 253 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 GP1BAP07359 652 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 PRLRP16471 622 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 HNRNPA2B1P22626 353 aaKnown RBP12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 AKT2P31751 481 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 NOS2P35228 1153 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 CLCN6P51797 869 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 SNX16P57768 344 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 PAK1Q13153 545 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 NME3Q13232 169 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 C11orf57Q6ZUT1 292 aaPredicted RBP12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 SLC26A9Q7LBE3 791 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 ABI3BPQ7Z7G0 1075 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 C14orf80Q86SX3 495 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF248Q8NDW4 579 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF578Q96N58 590 aaPredicted RBP12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 NOX5Q96PH1 765 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 PSMB7Q99436 277 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 MUC3BQ9H195 1237 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 UCKL1Q9NWZ5 548 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
CARMIL3-204ENST00000561354 NEMP2A6NFY4 417 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 M0QYT0 321 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 KPNA3O00505 521 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 OPA1O60313 960 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DAB1O75553 588 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 GRAP2O75791 330 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 ALPPL2P10696 532 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 CXCR3P49682 368 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 STX17P56962 302 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 SLC6A3Q01959 620 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 CCDC173Q0VFZ6 552 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 BRMS1LQ5PSV4 323 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 ERN2Q76MJ5 926 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DCAF4L2Q8NA75 395 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 SHC3Q92529 594 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 KLK6Q92876 244 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 ARRDC3Q96B67 414 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 HIC2Q96JB3 615 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 APOLD1Q96LR9 279 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 NPY6RQ99463 290 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 MYOCQ99972 504 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 HDAC8Q9BY41 377 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 SIK2Q9H0K1 926 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 ARHGEF38Q9NXL2 777 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 NLGN3Q9NZ94 848 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 VPS51Q9UID3 782 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 PCDHB1Q9Y5F3 818 aa12.11□□□□□ -0.47
CARMIL3-204ENST00000561354 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 DRGXA6NNA5 263 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 K7ERQ8 282 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 SCAMP1O15126 338 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 FFAR2O15552 330 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 LZTS3O60299 673 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 SNAP91O60641 907 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 CNTN5O94779 1100 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ERBB2P04626 1255 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 RHOCP08134 193 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 SLC9A1P19634 815 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 GGCXP38435 758 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 USP8P40818 1118 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 LSSP48449 732 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 DUSP3P51452 185 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 PCBP4P57723 403 aaKnown RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ERVPABLB-1P60509 514 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 CXADRP78310 365 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 PTK2Q05397 1052 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms