RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 M0QYT0 321 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 ALOX15BO15296 676 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 MSI1O43347 362 aaKnown RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 BNIP3LO60238 219 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 LUC7L3O95232 432 aaKnown RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 BMP15O95972 392 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 ZBED1O96006 694 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 PRKAR1AP10644 381 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 LIFP15018 202 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 VAV1P15498 845 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 TXLNAP40222 546 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 STK19P49842 368 aaPredicted RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 COPB1P53618 953 aaKnown RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 CCL7P80098 99 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 SGSM1Q2NKQ1 1148 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 PRRT3Q5FWE3 981 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 PHF19Q5T6S3 580 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 C1QL3Q5VWW1 255 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 MMS22LQ6ZRQ5 1243 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 CCDC65Q8IXS2 484 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 ARL10Q8N8L6 244 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 OR6C4Q8NGE1 309 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 CPT1CQ8TCG5 803 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 ZNF516Q92618 1163 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 ELMO3Q96BJ8 720 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 DNAJC19Q96DA6 116 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 LMLNQ96KR4 655 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 IPO9Q96P70 1041 aaKnown RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 HAPLN3Q96S86 360 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 FGFBP2Q9BYJ0 223 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 SLC13A1Q9BZW2 595 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 B3GNT4Q9C0J1 378 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 LRRN3Q9H3W5 708 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 SLC25A13Q9UJS0 675 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 SARDHQ9UL12 918 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 TP53TG5Q9Y2B4 290 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
HERC1-210ENST00000560897 CELSR2Q9HCU4 2923 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 LMO7DNF2Z398 122 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 KPNA3O00505 521 aaPredicted RBP9.8□□□□□ -0.84
HERC1-210ENST00000560897 FPGTO14772 594 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 EIF3DO15371 548 aaKnown RBP eCLIP9.8□□□□□ -0.84
HERC1-210ENST00000560897 ACSL4O60488 711 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 RNF224P0DH78 156 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 ETV5P41161 510 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 TKTL1P51854 596 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 THOP1P52888 689 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 RPS24P62847 133 aaKnown RBP9.8□□□□□ -0.84
HERC1-210ENST00000560897 NUCB2P80303 420 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 C1orf61Q13536 156 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 PTK2BQ14289 1009 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 PPP1R26Q5T8A7 1209 aaPredicted RBP9.8□□□□□ -0.84
HERC1-210ENST00000560897 PIP5KL1Q5T9C9 394 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 RRAGBQ5VZM2 374 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 PIGZQ86VD9 579 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 EDEM1Q92611 657 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 TAF4BQ92750 862 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 NKD1Q969G9 470 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 KIAA1143Q96AT1 154 aaPredicted RBP9.8□□□□□ -0.84
HERC1-210ENST00000560897 CCDC114Q96M63 670 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 EPAS1Q99814 870 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 EFHD1Q9BUP0 239 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 INTS2Q9H0H0 1204 aaKnown RBP9.8□□□□□ -0.84
HERC1-210ENST00000560897 CDH19Q9H159 772 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 LRRC4Q9HBW1 653 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 DONSONQ9NYP3 566 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 SIRPGQ9P1W8 387 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 PPM1HQ9ULR3 514 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 LIMCH1Q9UPQ0 1083 aa9.8□□□□□ -0.84
HERC1-210ENST00000560897 FRMD3A2A2Y4 597 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 POM121BA6NF01 834 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 MKRN2OSH3BPM6 223 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 CLIC2O15247 247 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 EXOC3O60645 756 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 RPN1P04843 607 aaKnown RBP9.79□□□□□ -0.84
HERC1-210ENST00000560897 ASPAP45381 313 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 RECQLP46063 649 aaPredicted RBP9.79□□□□□ -0.84
HERC1-210ENST00000560897 CASP4P49662 377 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 TAS2R38P59533 333 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 RPS21P63220 83 aaKnown RBP9.79□□□□□ -0.84
HERC1-210ENST00000560897 CDC20Q12834 499 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 DEFB109BQ30KR1 87 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 FAM133BQ5BKY9 247 aaKnown RBP9.79□□□□□ -0.84
HERC1-210ENST00000560897 FSCBQ5H9T9 825 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 SEL1L3Q68CR1 1132 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 KIAA1161Q6NSJ0 714 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 PHACTR4Q8IZ21 702 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 CACNA2D3Q8IZS8 1091 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 APCDD1Q8J025 514 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 RBFAQ8N0V3 343 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 SIX6OS1Q8N1H7 587 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 KYQ8NBH2 561 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 CCDC112Q8NEF3 446 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 BMFQ96LC9 184 aa9.79□□□□□ -0.84
HERC1-210ENST00000560897 PRICKLE1Q96MT3 831 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms