RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	PREB	Q9HCU5	417 aa		14	□□□□□ -0.17
RNF31-223	ENST00000560754	CFAP46	Q8IYW2	2715 aa		14	□□□□□ -0.17
RNF31-223	ENST00000560754	PTPRQ	Q9UMZ3	2332 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	C1QTNF3-AMACR	E9PGA6	284 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	CTSL	P07711	333 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	PRKCSH	P14314	528 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF18	P17022	549 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	CKMT2	P17540	419 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	TFE3	P19532	575 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	MAT2A	P31153	395 aa	Known RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	CHRNA3	P32297	505 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	CCDC15	Q0P6D6	951 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	RTP5	Q14D33	572 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	CAMK4	Q16566	473 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	SLC25A52	Q3SY17	297 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	SETMAR	Q53H47	684 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	PIP5KL1	Q5T9C9	394 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	BNIPL	Q7Z465	357 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	RFFL	Q8WZ73	363 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	KLHDC7B	Q96G42	594 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	NRSN2	Q9GZP1	204 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	TKTL2	Q9H0I9	626 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	NDST4	Q9H3R1	872 aa		13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF31-223	ENST00000560754		K7ERQ8	282 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	SMAD6	O43541	496 aa	Known RBP	13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	SNAP91	O60641	907 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	ACP1	P24666	158 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	HNF1B	P35680	557 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	MTIF2	P46199	727 aa	Known RBP	13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	CLCN6	P51797	869 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	UBE2H	P62256	183 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	KCNMA1	Q12791	1236 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF211	Q13398	564 aa	Predicted RBP	13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	ACAP1	Q15027	740 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	MAN2A1	Q16706	1144 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	PROX2	Q3B8N5	592 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	MIIP	Q5JXC2	388 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	ARC	Q7LC44	396 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	TMEM35B	Q8NCS4	154 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	C18orf8	Q96DM3	657 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	HAPLN3	Q96S86	360 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	MUC3B	Q9H195	1237 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	PLCB1	Q9NQ66	1216 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF212	Q9UDV6	495 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	VPS51	Q9UID3	782 aa		13.98	□□□□□ -0.17
RNF31-223	ENST00000560754	MGA	Q8IWI9	3026 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	SMG1	Q96Q15	3661 aa	Known RBP	13.97	□□□□□ -0.17
RNF31-223	ENST00000560754		A0A0D9SEW6	157 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	RNF103	O00237	685 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF821	O75541	412 aa	Predicted RBP	13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ENDOD1	O94919	500 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	CYP11B1	P15538	503 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	GGCX	P38435	758 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	RNASE9	P60153	205 aa	Known RBP	13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	SLC20A2	Q08357	652 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF284	Q2VY69	593 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	VWA3B	Q502W6	1294 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	LRRC31	Q6UY01	552 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ZNF783	Q6ZMS7	281 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ATP11C	Q8NB49	1132 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	ARRDC3	Q96B67	414 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	LRIG1	Q96JA1	1093 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	NAA15	Q9BXJ9	866 aa	Known RBP	13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	HDAC8	Q9BY41	377 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	SYNC	Q9H7C4	482 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	KLHL11	Q9NVR0	708 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	TMEM59L	Q9UK28	342 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	STAP1	Q9ULZ2	295 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	PAXBP1	Q9Y5B6	917 aa		13.97	□□□□□ -0.17
RNF31-223	ENST00000560754	CXorf51A	A0A1B0GTR3	108 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754		A0A1W2PQU0	124 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	ILVBL	A1L0T0	632 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	TRIM38	O00635	465 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	SLC31A1	O15431	190 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	SIGLEC6	O43699	453 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	ZMPSTE24	O75844	475 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	PRNP	P04156	253 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	RHOC	P08134	193 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	PNMA6A	P0CW24	399 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	GIMD1	P0DJR0	217 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	DGKA	P23743	735 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	RRM1	P23921	792 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	ERCC5	P28715	1186 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	EIF2S3	P41091	472 aa	Known RBP	13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	CLDN6	P56747	220 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	DEUP1	Q05D60	604 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	DRAP1	Q14919	205 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	POM121L1P	Q3SYA9	428 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	TMEM259	Q4ZIN3	620 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	C6orf118	Q5T5N4	469 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	HES3	Q5TGS1	186 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	KLHDC7A	Q5VTJ3	777 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	HORMAD1	Q86X24	394 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	ERICH1	Q86X53	443 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	XYLT1	Q86Y38	959 aa		13.96	□□□□□ -0.17
RNF31-223	ENST00000560754	DCAF4L2	Q8NA75	395 aa		13.96	□□□□□ -0.17

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