RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 HES6Q96HZ4 224 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 MRGPRX3Q96LB0 322 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 TSGA13Q96PP4 275 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 CACNA2D2Q9NY47 1150 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 TFR2Q9UP52 801 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 PCDHGA2Q9Y5H1 932 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 PPP1R12AO14974 1030 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 MTSS1O43312 755 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 PRAMEF11O60813 436 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ADAM23O75077 832 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ZMPSTE24O75844 475 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 TJP3O95049 919 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 CES1P23141 567 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 CCNCP24863 283 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 OXTRP30559 389 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 CDKN2BP42772 138 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 PEX5P50542 639 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 SNRPD1P62314 119 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 PDK1Q15118 436 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 RPS6KA1Q15418 735 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 DLG2Q15700 870 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 TTC31Q49AM3 519 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ACCSLQ4AC99 568 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ATP13A4Q4VNC1 1196 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 RALGPS1Q5JS13 557 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 SPOCD1Q6ZMY3 1216 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ATPAF2Q8N5M1 289 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 CYB5D2Q8WUJ1 264 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 OR8D1Q8WZ84 308 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 NELL1Q92832 810 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 PSMB7Q99436 277 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 MAGEB5Q9BZ81 275 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 CARD9Q9H257 536 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 SP110Q9HB58 689 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 NDFIP2Q9NV92 336 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 UBA2Q9UBT2 640 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 TPX2Q9ULW0 747 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 SPAG17Q6Q759 2223 aa12.3□□□□□ -0.44
RABGGTA-215ENST00000560207 A0A1W2PQF6 199 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 C3orf70A6NLC5 250 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 C1QTNF3-AMACRE9PGA6 284 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 K7ESF4 209 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 DFFAO00273 331 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 MCF2LO15068 1137 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 ADH1BP00325 375 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 GSRP00390 522 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 PRNPP04156 253 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 SRCP12931 536 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 TNNT1P13805 278 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 CSNK1DP48730 415 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 SATB1Q01826 763 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 GALNT2Q10471 571 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 HNRNPDQ14103 355 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 USP39Q53GS9 565 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 ZNF776Q68DI1 518 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 WDR5BQ86VZ2 330 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 RFX6Q8HWS3 928 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 OR52K2Q8NGK3 314 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 MAIP1Q8WWC4 291 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 PRCCQ92733 491 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 P3H4Q92791 437 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 HAUS1Q96CS2 278 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 MYO19Q96H55 970 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 SPACA7Q96KW9 195 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 RPL10LQ96L21 214 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 FRMD8P1Q9BZ68 369 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 RSPH9Q9H1X1 276 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 KCNF1Q9H3M0 494 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 HCN2Q9UL51 889 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 CAPN6Q9Y6Q1 641 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 CEP192Q8TEP8 1941 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
RABGGTA-215ENST00000560207 A0A1W2PQ67 120 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 TCRBV21S2A2A0A5A6 115 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 HACD1B0YJ81 288 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 AXIN1O15169 862 aa12.28□□□□□ -0.44
RABGGTA-215ENST00000560207 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms