RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FAM83CQ9BQN1 747 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ETNK1Q9HBU6 452 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 KIAA1522Q9P206 1035 aaPredicted RBP12.44□□□□□ -0.42
HERC1-205ENST00000559886 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
HERC1-205ENST00000559886 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 ERLIN1O75477 346 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 CYP17A1P05093 508 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 FDFT1P37268 417 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 CSKP41240 450 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 TNK2Q07912 1038 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 CCDC85BQ15834 202 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 PARP6Q2NL67 630 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 PPIL6Q8IXY8 311 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 TEX26Q8N6G2 289 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 ZNF557Q8N988 423 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 UBE2ZQ9H832 354 aaPredicted RBP12.43□□□□□ -0.42
HERC1-205ENST00000559886 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.42
HERC1-205ENST00000559886 EPS15L1Q9UBC2 864 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 GLDCP23378 1020 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 MAGEA6P43360 314 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 PLK1P53350 603 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SLC10A7Q0GE19 358 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 LMAN2Q12907 356 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SEMA5AQ13591 1074 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SLC12A1Q13621 1099 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 PDGFRLQ15198 375 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 MARC1Q5VT66 337 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 ITPRIPL1Q6GPH6 555 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 OTOP3Q7RTS5 596 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 NAT8LQ8N9F0 302 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 USP33Q8TEY7 942 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 NSMCE1Q8WV22 266 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 FGF14Q92915 247 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 ATP2A3Q93084 1043 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 ZFYVE19Q96K21 471 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 GUCD1Q96NT3 240 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 FMO2Q99518 471 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SLC2A11Q9BYW1 496 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 PLA2G2FQ9BZM2 168 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 GBA3Q9H227 469 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SHOC2Q9UQ13 582 aa12.43□□□□□ -0.42
HERC1-205ENST00000559886 SMAPO00193 183 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 CBX4O00257 560 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 CHADO15335 359 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 HOXC11O43248 304 aaPredicted RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 CACNG3O60359 315 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ECI2O75521 394 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ZMPSTE24O75844 475 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 NFATC1O95644 943 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ADH1CP00326 375 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 FAM153BP0C7A2 387 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ARSAP15289 507 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 KCNA5P22460 613 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 HLA-FP30511 346 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 CD70P32970 193 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 NUMBP49757 651 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 KCNJ11Q14654 390 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 FAM153CQ494X1 144 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 FAXCQ5TGI0 409 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 TMCO4Q5TGY1 634 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ANKRD22Q5VYY1 191 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 EMBQ6PCB8 327 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 DCAF4L2Q8NA75 395 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 PRCCQ92733 491 aaPredicted RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 EBF3Q9H4W6 596 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 MTRF1LQ9UGC7 380 aaKnown RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 FAM153AQ9UHL3 310 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 FBXO10Q9UK96 956 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 PRUNE2Q8WUY3 3088 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 HLA-DQB2P05538 268 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ADH5P11766 374 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 PSMC3P17980 439 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 PSMB4P28070 264 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ARF5P84085 180 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 GAD2Q05329 585 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 LBRQ14739 615 aaKnown RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 ASTLQ6HA08 431 aaPredicted RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 MTSS1LQ765P7 747 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 APCDD1Q8J025 514 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 C2orf49Q9BVC5 232 aaPredicted RBP12.42□□□□□ -0.42
HERC1-205ENST00000559886 ABCB8Q9NUT2 735 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 RSPH14Q9UHP6 348 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 ATP8A1Q9Y2Q0 1164 aa12.42□□□□□ -0.42
HERC1-205ENST00000559886 TCRBV7S3A2A0A539 114 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms