RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ATCAYQ86WG3 371 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 SPATA20Q8TB22 786 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 RNF139Q8WU17 664 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 NAT6Q93015 286 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 TATDN2Q93075 761 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 GFM1Q96RP9 751 aaKnown RBP12.21□□□□□ -0.45
SMAD3-206ENST00000558739 LRRC61Q9BV99 259 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 CPEB1Q9BZB8 566 aaKnown RBP12.21□□□□□ -0.45
SMAD3-206ENST00000558739 SIRPGQ9P1W8 387 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 CSNK1G3Q9Y6M4 447 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 MED13LQ71F56 2210 aa12.21□□□□□ -0.46
SMAD3-206ENST00000558739 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PRR19A6NJB7 356 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 EIF3DO15371 548 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 CLDN1O95832 211 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 HLA-DRAP01903 254 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PRKCGP05129 697 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 LIFP15018 202 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PDGFRAP16234 1089 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 ADKP55263 362 aaKnown RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 SGSM1Q2NKQ1 1148 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 ZACNQ401N2 412 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 TMEM259Q4ZIN3 620 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 KYAT3Q6YP21 454 aaKnown RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 ZNF507Q8TCN5 953 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 OR8D1Q8WZ84 308 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 ABHD17AQ96GS6 310 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 CLPBQ9H078 707 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 OLA1Q9NTK5 396 aaKnown RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 FBXO2Q9UK22 296 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 PADI4Q9UM07 663 aa12.2□□□□□ -0.46
SMAD3-206ENST00000558739 ZNF106Q9H2Y7 1883 aaKnown RBP12.2□□□□□ -0.46
SMAD3-206ENST00000558739 H3BM21 787 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 IRAK2O43187 625 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 DUX1O43812 170 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 EXOC3O60645 756 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 PCDH8O95206 1070 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 GRNP28799 593 aaKnown RBP12.19□□□□□ -0.46
SMAD3-206ENST00000558739 CCKBRP32239 447 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 STAT6P42226 847 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 SLC11A2P49281 568 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 MS4A13Q5J8X5 152 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 FAM46CQ5VWP2 391 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 CCDC65Q8IXS2 484 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 OR52K2Q8NGK3 314 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 WDR48Q8TAF3 677 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
SMAD3-206ENST00000558739 GULP1Q9UBP9 304 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 APOBEC3BQ9UH17 382 aaKnown RBP12.19□□□□□ -0.46
SMAD3-206ENST00000558739 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
SMAD3-206ENST00000558739 DIDO1Q9BTC0 2240 aaKnown RBP12.19□□□□□ -0.46
SMAD3-206ENST00000558739 LRP4O75096 1905 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 A0A1W2PQ27 194 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 A0A1W2PQ64 194 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 A0A1W2PQC6 194 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 PIK3R2O00459 728 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 KPNA3O00505 521 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 TPP1O14773 563 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 YY2O15391 372 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 NKX2-8O15522 239 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 GABBR2O75899 941 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 MOCS2O96007 188 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 OXCT1P55809 520 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 GOLGA7BQ2TAP0 167 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 ACCSLQ4AC99 568 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 MSANTD2Q6P1R3 559 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 SFTPA2Q8IWL1 248 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 PDILTQ8N807 584 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 ZNF557Q8N988 423 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 PCDH19Q8TAB3 1148 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 NKD1Q969G9 470 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 TP53TG5Q9Y2B4 290 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
SMAD3-206ENST00000558739 MAP1AP78559 2803 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 TNRC6AQ8NDV7 1962 aaKnown RBP12.18□□□□□ -0.46
SMAD3-206ENST00000558739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 C1QTNF3-AMACRE9PGA6 284 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 LMO7DNF2Z398 122 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 MCF2LO15068 1137 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 MOCS3O95396 460 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 PAK4O96013 591 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 CCL4P13236 92 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 TSHRP16473 764 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 CASP1P29466 404 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 RPIAP49247 311 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms