RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 TCAF2A6NFQ2 919 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 DRGXA6NNA5 263 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 H3BRJ5 948 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 CACNG3O60359 315 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 AMPD1P23109 780 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 KDELR1P24390 212 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 CDH4P55283 916 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 NRG1Q02297 640 aaPredicted RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 LLGL1Q15334 1064 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 DPYSL2Q16555 572 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 FSCBQ5H9T9 825 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 ZNF569Q5MCW4 686 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 GRAMD4Q6IC98 578 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 RAPGEF5Q92565 580 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 EDAQ92838 391 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 PNKPQ96T60 521 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 P2RY13Q9BPV8 354 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 FBRSL1Q9HCM7 1045 aaKnown RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 PPARGC1AQ9UBK2 798 aaKnown RBP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 DNAI1Q9UI46 699 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 DCTN4Q9UJW0 460 aa12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
HMGB1P8-201ENST00000558211 NUP205Q92621 2012 aa12.33□□□□□ -0.43
HMGB1P8-201ENST00000558211 F5P12259 2224 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 IGLV3-10A0A075B6K4 115 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 MAN2B1O00754 1011 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 PSTPIP1O43586 416 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CLDN11O75508 207 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 APODP05090 189 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 RHOCP08134 193 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 ALADP13716 330 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 GLULP15104 373 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 ERCC2P18074 760 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 OR1E1P30953 314 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CD70P32970 193 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 PRKCQQ04759 706 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 MESP2Q0VG99 397 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 LMAN2Q12907 356 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 DPYSL3Q14195 570 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 UBXN2BQ14CS0 331 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 PDK2Q15119 407 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 C5orf22Q49AR2 442 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 ARTNQ5T4W7 220 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 LRRC38Q5VT99 294 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 ZNF852Q6ZMS4 543 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 POLNQ7Z5Q5 900 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 MAP7D3Q8IWC1 876 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 NETO2Q8NC67 525 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 FLCNQ8NFG4 579 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 FIBINQ8TAL6 211 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 SHDQ96IW2 340 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 NCOR1O75376 2440 aa12.33□□□□□ -0.44
HMGB1P8-201ENST00000558211 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 KIF5CO60282 957 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 KAT7O95251 611 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 EGFP01133 1207 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 EPXP11678 715 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 CTNNA2P26232 953 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 MAPK1P28482 360 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 HLA-FP30511 346 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 CTNNA1P35221 906 aaKnown RBP12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 CSKP41240 450 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 ARSEP51690 589 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 RNF219Q5W0B1 726 aaPredicted RBP12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 KAZNQ674X7 775 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 MFSD7Q6UXD7 560 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 ZNF354CQ86Y25 554 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 SFTPA1Q8IWL2 248 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 SLC35F6Q8N357 371 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 UBL4BQ8N7F7 174 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 OR52K2Q8NGK3 314 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 CSPG4P5Q96PW8 444 aa12.32□□□□□ -0.44
HMGB1P8-201ENST00000558211 SPON2Q9BUD6 331 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms