RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 LYPLA2O95372 231 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 FAM228BP0C875 321 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 GRSF1Q12849 480 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD8-213ENST00000557364 PACS1Q6VY07 963 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SLC44A2Q8IWA5 706 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 OR52L1Q8NGH7 329 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SPATA13Q96N96 652 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ULBP1Q9BZM6 244 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 DNAAF2Q9NVR5 837 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 DDX20Q9UHI6 824 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 HPSEQ9Y251 543 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 KCNE2Q9Y6J6 123 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 RECQL5O94762 991 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 ITGA2P17301 1181 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 MYL12AP19105 171 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ERVK-21P61565 698 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 ZNF470Q6ECI4 717 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TPGS1Q6ZTW0 290 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 TTC7BQ86TV6 843 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 SMG7Q92540 1137 aaKnown RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 FAM111AQ96PZ2 611 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 KCTD14Q9BQ13 255 aaPredicted RBP8.48□□□□□ -1.05
CHD8-213ENST00000557364 AGXT2Q9BYV1 514 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 THAP1Q9NVV9 213 aa8.48□□□□□ -1.05
CHD8-213ENST00000557364 CENPXA8MT69 81 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ATP4AP20648 1035 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 PTPN9P43378 593 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ATP6V0D1P61421 351 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 UBE3AQ05086 875 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 PTGES3Q15185 160 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 ALFQ53S48 1182 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 KCNT1Q5JUK3 1230 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 WSCD1Q658N2 575 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DSELQ8IZU8 1212 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 BTN2A3PQ96KV6 586 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ZCCHC17Q9NP64 241 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 RCOR3Q9P2K3 495 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 GTF2A1LQ9UNN4 478 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 ATG13O75143 517 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ACAT1P24752 427 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 KLC1Q07866 573 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DDR2Q16832 855 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ZFP1Q6P2D0 407 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TTC33Q6PID6 262 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 POLNQ7Z5Q5 900 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 LONP2Q86WA8 852 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DENND1AQ8TEH3 1009 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 MAGED4Q96JG8 741 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ASB8Q9H765 288 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 MORF4L1Q9UBU8 362 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ZNHIT2Q9UHR6 403 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 PGK1P00558 417 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 IFNA16P05015 189 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 MRPS25P82663 173 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 FRG1Q14331 258 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 KPNB1Q14974 876 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 DOK6Q6PKX4 331 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TSHZ1Q6ZSZ6 1077 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 KLHL23Q8NBE8 558 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 WDR24Q96S15 920 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DUOX1Q9NRD9 1551 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 CCDC154A6NI56 674 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 MGRN1O60291 552 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TRIM13O60858 407 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 SEC22BO75396 215 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 STXBP5Q5T5C0 1151 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 NPAS4Q8IUM7 802 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DENND6AQ8IWF6 608 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 FNDC5Q8NAU1 212 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ABTB1Q969K4 478 aaPredicted RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 SAMD11Q96NU1 681 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TBCDQ9BTW9 1192 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 DUSP16Q9BY84 665 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 RPS6KA6Q9UK32 745 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 CYP7B1O75881 506 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 CCDC130P13994 396 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ACADSP16219 412 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TM4SF1P30408 202 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 SMAD3P84022 425 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 POU5F1Q01860 360 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 SRSF11Q05519 484 aaKnown RBP8.47□□□□□ -1.05
CHD8-213ENST00000557364 STX4Q12846 297 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 TRIP10Q15642 601 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ARHGAP17Q68EM7 881 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 MACC1Q6ZN28 852 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 WFIKKN2Q8TEU8 576 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 METTL21AQ8WXB1 218 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 IL1RL2Q9HB29 575 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 IL17RBQ9NRM6 502 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 IL1RAPL1Q9NZN1 696 aa8.47□□□□□ -1.05
CHD8-213ENST00000557364 ZBTB39O15060 712 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms