RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 KLHL25Q9H0H3 589 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 PLGRKTQ9HBL7 147 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 DAPK2Q9UIK4 370 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 MYH7BA7E2Y1 1941 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 NWD2Q9ULI1 1742 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 ODC1P11926 461 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 STK32CQ86UX6 486 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 PIGZQ86VD9 579 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 CENPLQ8N0S6 344 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZNF781Q8N8C0 355 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 PANX3Q96QZ0 392 aa15.25■□□□□ 0.03
ARHGEF40-207ENST00000556399 MYH13Q9UKX3 1938 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CXorf49A8MYA2 514 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 MYO1DO94832 1006 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 OAS1P00973 400 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 LHX1P48742 406 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 ZDHHC14Q8IZN3 488 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 MAGEE2Q8TD90 523 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 COPS5Q92905 334 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 ASIC4Q96FT7 647 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 ALG9Q9H6U8 611 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CLK4Q9HAZ1 481 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 VPS26AO75436 327 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 B3GAT3O94766 335 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CCDC166P0CW27 439 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 ERCC2P18074 760 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CTBP1Q13363 440 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 FAM98BQ52LJ0 330 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CELF3Q5SZQ8 465 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 SH3PXD2AQ5TCZ1 1133 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 MYO1HQ8N1T3 1032 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC7A6OSQ96CW6 309 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 RPRD1AQ96P16 312 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 EIF3LQ9Y262 564 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC15A5A6NIM6 579 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 ADCY6O43306 1168 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 LTA4HP09960 611 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 USP17L7P0C7H9 530 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 RGS4P49798 205 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 GALK1P51570 392 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 RAP1GDS1P52306 607 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CERCAMQ5T4B2 595 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 C1orf127Q8N9H9 656 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 OR9Q1Q8NGQ5 310 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 QKIQ96PU8 341 aaKnown RBP eCLIP15.24■□□□□ 0.033e-7■■■□□ 15.6
ARHGEF40-207ENST00000556399 OR12D3Q9UGF7 316 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 MTF2Q9Y483 593 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 GCATO75600 419 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 IVDP26440 423 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 TTKP33981 857 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 GTF2A2P52657 109 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 PAN2Q504Q3 1202 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 GK5Q6ZS86 529 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 LRRC8DQ7L1W4 858 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 TTC30AQ86WT1 665 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 MRPL45Q9BRJ2 306 aaKnown RBP15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 VPS9D1Q9Y2B5 631 aa15.24■□□□□ 0.03
ARHGEF40-207ENST00000556399 CCDC154A6NI56 674 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 C2CD4BA6NLJ0 364 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 KLF11O14901 512 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MATKP42679 507 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 PCDH19Q8TAB3 1148 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MRPL57Q9BQC6 102 aaKnown RBP15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MYH3P11055 1940 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 LTFP02788 710 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC2A3P11169 496 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 PRDX6P30041 224 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 SLC18A2Q05940 514 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 TWF1Q12792 350 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MARC1Q5VT66 337 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 FBXO39Q8N4B4 442 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 FAM47BQ8NA70 645 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MROH8Q9H579 483 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 POLR1BQ9H9Y6 1135 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ENTPD7Q9NQZ7 604 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ABI2Q9NYB9 513 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ATP6AP2A0A1C7CYW4 349 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 EVPLLA8MZ36 301 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ATP6AP2O75787 350 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 RECQL4O94761 1208 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 FARP2O94887 1054 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 MTX3Q5HYI7 312 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 KCTD15Q96SI1 283 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 TCF12Q99081 682 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 HES2Q9Y543 173 aa15.23■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 CFAP99D6REC4 459 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 STX7O15400 261 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 MFSD11O43934 449 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 TRMUO75648 421 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 TSPAN8P19075 237 aa15.22■□□□□ 0.03
ARHGEF40-207ENST00000556399 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms