RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 SLC11A1P49279 550 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 TMEM173Q86WV6 379 aaPredicted RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 CXorf38Q8TB03 319 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 FAM193BQ96PV7 902 aaPredicted RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 EBF4Q9BQW3 602 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 MECRQ9BV79 373 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.6□□□□□ -0.23
SIX1-203ENST00000554986 SLC38A7Q9NVC3 462 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 BCAP29Q9UHQ4 241 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PRPF19Q9UMS4 504 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 TCRBV5S1A1TA0A578 114 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 C3orf70A6NLC5 250 aaPredicted RBP13.59□□□□□ -0.23
SIX1-203ENST00000554986 SIN3BO75182 1162 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 E2F6O75461 281 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 PDE5AO76074 875 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 STK10O94804 968 aaKnown RBP13.59□□□□□ -0.23
SIX1-203ENST00000554986 FBXO21O94952 628 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 PROCP04070 461 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 GALTP07902 379 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 ACO1P21399 889 aaKnown RBP13.59□□□□□ -0.23
SIX1-203ENST00000554986 MMP8P22894 467 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 EPHB1P54762 984 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 BCAR1P56945 870 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
SIX1-203ENST00000554986 ZNF252P-AS1Q0IIN9 211 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 RAB30Q15771 203 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
SIX1-203ENST00000554986 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 SMYD5Q6GMV2 418 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 LRRC8BQ6P9F7 803 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 TIFABQ6ZNK6 161 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 IGDCC3Q8IVU1 814 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 ACTL9Q8TC94 416 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 RSAD2Q8WXG1 361 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 TSPAN18Q96SJ8 248 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 KLC2Q9H0B6 622 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 KLHL11Q9NVR0 708 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 DPP3Q9NY33 737 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 VPS28Q9UK41 221 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 TTLL3Q9Y4R7 772 aa13.59□□□□□ -0.23
SIX1-203ENST00000554986 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ZNF701M0R085 212 aaPredicted RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 SOX1O00570 391 aaPredicted RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 NRP1O14786 923 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ITM2AO43736 263 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 PIAS1O75925 651 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 KRT38O76015 456 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ITGB1P05556 798 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 CALB1P05937 261 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 OR1G1P47890 313 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 GDF10P55107 478 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 OXCT1P55809 520 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 NUP107P57740 925 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 UPP1Q16831 310 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 DUOXA2Q1HG44 320 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 TDRD10Q5VZ19 366 aaKnown RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 POTEHQ6S545 545 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 KCNT2Q6UVM3 1135 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 COLGALT1Q8NBJ5 622 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 BEST2Q8NFU1 509 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 ITPKCQ96DU7 683 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 C20orf27Q9GZN8 174 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 MARCH5Q9NX47 278 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 MSRAQ9UJ68 235 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 RIMS3Q9UJD0 308 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ARHGAP26Q9UNA1 814 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 PLXNA4Q9HCM2 1894 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 CHADO15335 359 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ZBED1O96006 694 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 C4BPAP04003 597 aaKnown RBP13.58□□□□□ -0.24
SIX1-203ENST00000554986 ALDH2P05091 517 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ITGB3P05106 788 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 TCF4P15884 667 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 CYP3A5P20815 502 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 LRPAP1P30533 357 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 TUBA4AP68366 448 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 COG7P83436 770 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 GSTM4Q03013 218 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 ZFYVE27Q5T4F4 411 aa13.58□□□□□ -0.24
SIX1-203ENST00000554986 DEFB107AQ8IZN7 70 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms