RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 K7ERQ8 282 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 SMAD6O43541 496 aaKnown RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 PCDHGA12O60330 932 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 DFNA5O60443 496 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 CYP1A1P04798 512 aaPredicted RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 ATXN1LP0C7T5 689 aaKnown RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 SRCP12931 536 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 MMP8P22894 467 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 RRM1P23921 792 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 CD38P28907 300 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 MAT2AP31153 395 aaKnown RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 CCT8P50990 548 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 COPB1P53618 953 aaKnown RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 JAM2P57087 298 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 PPP2CBP62714 309 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 PPP2CAP67775 309 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 FMO1Q01740 532 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 CNTN1Q12860 1018 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 SYCP1Q15431 976 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 RBM43Q6ZSC3 357 aaKnown RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 ARCQ7LC44 396 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 GLRX5Q86SX6 157 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 KDF1Q8NAX2 398 aaPredicted RBP12.16□□□□□ -0.46
PSMC6-207ENST00000554952 RXFP2Q8WXD0 754 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 PSMB7Q99436 277 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 VPS51Q9UID3 782 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 HS3ST2Q9Y278 367 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 SIK3Q9Y2K2 1263 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 ACACAQ13085 2346 aa12.16□□□□□ -0.46
PSMC6-207ENST00000554952 ANKRD11Q6UB99 2663 aaPredicted RBP12.15□□□□□ -0.46
PSMC6-207ENST00000554952 IGLV3-10A0A075B6K4 115 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 FAM221BA6H8Z2 402 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CBX4O00257 560 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 ALOX15BO15296 676 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 SLC7A4O43246 635 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 ENDOD1O94919 500 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 GJB6O95452 261 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 GLDCP23378 1020 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 SDC4P31431 198 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CHRNA3P32297 505 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 MYL5Q02045 173 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 UBXN1Q04323 297 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CDO1Q16878 200 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 C15orf59Q2T9L4 293 aaPredicted RBP12.15□□□□□ -0.46
PSMC6-207ENST00000554952 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CCDC14Q49A88 953 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 RAB6CQ53S08 254 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CCDC157Q569K6 752 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 SLC45A4Q5BKX6 768 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 BNIPLQ7Z465 357 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 GATAD2AQ86YP4 633 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 NEK11Q8NG66 645 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 OR7D4Q8NG98 312 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 PCDHB18PQ96TA0 734 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
PSMC6-207ENST00000554952 ZYG11BQ9C0D3 744 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
PSMC6-207ENST00000554952 LIMA1Q9UHB6 759 aaKnown RBP12.15□□□□□ -0.46
PSMC6-207ENST00000554952 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
PSMC6-207ENST00000554952 FAM208BQ5VWN6 2430 aa12.15□□□□□ -0.47
PSMC6-207ENST00000554952 PLXNA2O75051 1894 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 CACNA1GO43497 2377 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 PKD1L2Q7Z442 2459 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 A0A1W2PR77 199 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 ILVBLA1L0T0 632 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 TLR4O00206 839 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 LATO43561 262 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 PLRG1O43660 514 aaKnown RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 CTSLP07711 333 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 KRT3P12035 628 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 ADRA1BP35368 520 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 GRK6P43250 576 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 RECQLP46063 649 aaPredicted RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 DNA2P51530 1060 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 STX1AQ16623 288 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 RETSATQ6NUM9 610 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 CHST14Q8NCH0 376 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 TMIEQ8NEW7 156 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 BAHD1Q8TBE0 780 aaPredicted RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 ZCCHC14Q8WYQ9 949 aaKnown RBP12.14□□□□□ -0.47
PSMC6-207ENST00000554952 TNKS2Q9H2K2 1166 aa12.14□□□□□ -0.47
PSMC6-207ENST00000554952 ATP13A1Q9HD20 1204 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms