RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CIR1Q86X95 450 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 SIX6OS1Q8N1H7 587 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 UBA3Q8TBC4 463 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 TFAP2BQ92481 460 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 ABCG4Q9H172 646 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 DNAJC28Q9NX36 388 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 NCKIPSDQ9NZQ3 722 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
PRKCH-208ENST00000553846 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
PRKCH-208ENST00000553846 SDK2Q58EX2 2172 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 A6NNZ2 444 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SPTLC2O15270 562 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 AQP9O43315 295 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 GCATO75600 419 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 LIPCP11150 499 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SFTPCP11686 197 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 PDGFRAP16234 1089 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 PDCP20941 246 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 TACR2P21452 398 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 AKT2P31751 481 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 UGT1A5P35504 534 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SLC8A3P57103 927 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SULT2A1Q06520 285 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 EIF2B5Q13144 721 aaKnown RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 DEFB133Q30KQ1 61 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 RNF219Q5W0B1 726 aaPredicted RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 KRT39Q6A163 491 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 LCLAT1Q6UWP7 414 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 USP53Q70EK8 1073 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 BEND5Q7L4P6 421 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 PARGQ86W56 976 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 LGI2Q8N0V4 545 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 CCAR2Q8N163 923 aaKnown RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SH2D3CQ8N5H7 860 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 OR2A12Q8NGT7 310 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 WDR48Q8TAF3 677 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 ERCC4Q92889 916 aaPredicted RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 TBATAQ96M53 351 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SERPINB11Q96P15 392 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 DDX50Q9BQ39 737 aaKnown RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 SLC25A18Q9H1K4 315 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 TCEAL2Q9H3H9 227 aaPredicted RBP9.31□□□□□ -0.92
PRKCH-208ENST00000553846 EVA1BQ9NVM1 165 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 HS3ST2Q9Y278 367 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 FRMD4BQ9Y2L6 1034 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 COQ4Q9Y3A0 265 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 HS3ST3A1Q9Y663 406 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 DOPEY1Q5JWR5 2465 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
PRKCH-208ENST00000553846 TYW5A2RUC4 315 aaKnown RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CPED1A4D0V7 1026 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 D6RAR5 112 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 C1QTNF3-AMACRE9PGA6 284 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 MUSKO15146 869 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 NVLO15381 856 aaKnown RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CUTAO60888 179 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PPFIA2O75334 1257 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 ZNF821O75541 412 aaPredicted RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 MOCS3O95396 460 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 GJB6O95452 261 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 MT-CO1P00395 513 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 LCP1P13796 627 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 NR2F2P24468 414 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CCKBRP32239 447 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 AFMP43652 599 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 RGS7P49802 495 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 INHBCP55103 352 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PFN3P60673 137 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PITX1P78337 314 aaPredicted RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 EIF3IQ13347 325 aaKnown RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 MORC3Q14149 939 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 NR0B2Q15466 257 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 DLG2Q15700 870 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CBWD6Q4V339 395 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CBWD3Q5JTY5 395 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CBWD5Q5RIA9 395 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 SYPL2Q5VXT5 272 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 RESP18Q5W5W9 173 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 RAP1GAP2Q684P5 730 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PTAR1Q7Z6K3 402 aaPredicted RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 C14orf80Q86SX3 495 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 VASH2Q86V25 355 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 DCP2Q8IU60 420 aaKnown RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 FAM174AQ8TBP5 190 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 ZNF564Q8TBZ8 553 aaPredicted RBP9.3□□□□□ -0.92
PRKCH-208ENST00000553846 NAT6Q93015 286 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 PSMB7Q99436 277 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 CCDC3Q9BQI4 270 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 FEM1AQ9BSK4 669 aa9.3□□□□□ -0.92
PRKCH-208ENST00000553846 LRRC61Q9BV99 259 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms