RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SEL1L3Q68CR1 1132 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 KYAT3Q6YP21 454 aaKnown RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 DTX1Q86Y01 620 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 LGI2Q8N0V4 545 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 SCML4Q8N228 414 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 BTN2A2Q8WVV5 523 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 KCTD13Q8WZ19 329 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 ERCC4Q92889 916 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 PPP1R13BQ96KQ4 1090 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 FCRL2Q96LA5 508 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 GFM1Q96RP9 751 aaKnown RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 SRRTQ9BXP5 876 aaKnown RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 TUBD1Q9UJT1 453 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 TSPAN16Q9UKR8 245 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 ZFC3H1O60293 1989 aaKnown RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 ICE1Q9Y2F5 2266 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 PRAMEF33A0A0G2JMD5 474 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 PRAMEF10O60809 474 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 PAK4O96013 591 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-204ENST00000553605 RABIFP47224 123 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 PLK1P53350 603 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 ADKP55263 362 aaKnown RBP14.17□□□□□ -0.14
PRPF39-204ENST00000553605 NUCB2P80303 420 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 PDE1CQ14123 709 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-204ENST00000553605 TMEM259Q4ZIN3 620 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 ESRP1Q6NXG1 681 aaKnown RBP14.17□□□□□ -0.14
PRPF39-204ENST00000553605 Q6ZVU0 165 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 UBA3Q8TBC4 463 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 DHX58Q96C10 678 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 SLC12A9Q9BXP2 914 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 SLC17A9Q9BYT1 436 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 SPASTQ9UBP0 616 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 SLC25A13Q9UJS0 675 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 LOXL2Q9Y4K0 774 aa14.17□□□□□ -0.14
PRPF39-204ENST00000553605 A0A1W2PQ27 194 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 A0A1W2PQ64 194 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 A0A1W2PQC6 194 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 D6RAR5 112 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 KPNA3O00505 521 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 SPTLC2O15270 562 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 GCATO75600 419 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 MOCS2O96007 188 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 NR3C1P04150 777 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 CTSLP07711 333 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 ITIH1P19827 911 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 CASP1P29466 404 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 CCKBRP32239 447 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 NOS2P35228 1153 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 EIF2B5Q13144 721 aaKnown RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 C1orf61Q13536 156 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 SLC39A14Q15043 492 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 PRRT3Q5FWE3 981 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 FAM173BQ6P4H8 233 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 IRGQQ8WZA9 623 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 RNF34Q969K3 372 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 FAXDC2Q96IV6 333 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 BLZF1Q9H2G9 400 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 DYRK4Q9NR20 520 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 FRMD4BQ9Y2L6 1034 aa14.16□□□□□ -0.14
PRPF39-204ENST00000553605 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 SPTBN1Q01082 2364 aaKnown RBP14.16□□□□□ -0.14
PRPF39-204ENST00000553605 PVALEFA0A1B0GWK0 134 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 LMO7DNF2Z398 122 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 RAD51BO15315 384 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 YY2O15391 372 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 SPINT1O43278 529 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 KRT38O76015 456 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 LTFP02788 710 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 ANXA6P08133 673 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 TRIM49P0CI25 452 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 TRIM49CP0CI26 452 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 TACR2P21452 398 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 CCL7P80098 99 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 FGL2Q14314 439 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 ATCAYQ86WG3 371 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 CHSY1Q86X52 802 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 RBFAQ8N0V3 343 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 IQUBQ8NA54 791 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 SPATA20Q8TB22 786 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 USP7Q93009 1102 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 SERPINB11Q96P15 392 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 PPP1R9BQ96SB3 815 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 ZNF71Q9NQZ8 489 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-204ENST00000553605 FOXJ2Q9P0K8 574 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 GULP1Q9UBP9 304 aa14.15□□□□□ -0.14
PRPF39-204ENST00000553605 APOBEC3BQ9UH17 382 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms