RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 DLDP09622 509 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 CDK4P11802 303 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 PABPC1P11940 636 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 JUPP14923 745 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 C21orf59P57076 290 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 GSTM4Q03013 218 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 CFHR1Q03591 330 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 TBC1D25Q3MII6 688 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 MPPE1Q53F39 396 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF776Q68DI1 518 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 CHST9Q7L1S5 443 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 AHI1Q8N157 1196 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 LINC00301Q8NCQ3 95 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 KIAA0895Q8NCT3 520 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 GOLGA1Q92805 767 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 FGF11Q92914 225 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 DHX58Q96C10 678 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 TMEM176AQ96HP8 235 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 LMLNQ96KR4 655 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 SEMA4CQ9C0C4 833 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 PABPC3Q9H361 631 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 MTG2Q9H4K7 406 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 SLC39A2Q9NP94 309 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 ABCB8Q9NUT2 735 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 GGA2Q9UJY4 613 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 TEX15Q9BXT5 2789 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CAPN9O14815 690 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 KLRC4O43908 158 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 LATS1O95835 1130 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ITGAVP06756 1048 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CD58P19256 250 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 FSTP19883 344 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ABCB4P21439 1286 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 SYT1P21579 422 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CD70P32970 193 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 PIK3CAP42336 1068 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 GALCP54803 685 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 NXPH1P58417 271 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF445P59923 1031 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 YWHAGP61981 247 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CXADRP78310 365 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 AMPD3Q01432 767 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ARID5AQ03989 594 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CCDC173Q0VFZ6 552 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ILKQ13418 452 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
ATXN3-219ENST00000553488 XP32Q5T750 250 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 MBLAC2Q68D91 279 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 NCEH1Q6PIU2 408 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 SHC4Q6S5L8 630 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 PIGZQ86VD9 579 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 FAM20CQ8IXL6 584 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 EID2Q8N6I1 236 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 DCBLD1Q8N8Z6 715 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 BLZF1Q9H2G9 400 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 KCTD10Q9H3F6 313 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 MAGEF1Q9HAY2 307 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 CYP3A43Q9HB55 503 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 STRIP2Q9ULQ0 834 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 SCML1Q9UN30 329 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 MTMR6Q9Y217 621 aa7.56□□□□□ -1.2
ATXN3-219ENST00000553488 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PVALEFA0A1B0GWK0 134 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 TULP2O00295 520 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 IKBKBO14920 756 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 MID1O15344 667 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 MSI1O43347 362 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 LATO43561 262 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 IGLV3-27P01718 113 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 NR3C1P04150 777 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PDCP20941 246 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ACP1P24666 158 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 CD38P28907 300 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ACTN2P35609 894 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 RXRGP48443 463 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 CCR5P51681 352 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ADPRHP54922 357 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PPP2CBP62714 309 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PPP2CAP67775 309 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 PPP3CAQ08209 521 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 BNIP3Q12983 259 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 STK4Q13043 487 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 CUL4BQ13620 913 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 CST6Q15828 149 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 HNRNPA1L2Q32P51 320 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 FAM133BQ5BKY9 247 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
ATXN3-219ENST00000553488 FMNL3Q8IVF7 1028 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 ARHGAP18Q8N392 663 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 IQUBQ8NA54 791 aa7.55□□□□□ -1.2
ATXN3-219ENST00000553488 SLC4A11Q8NBS3 891 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms