RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZNF177Q13360 481 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 AUHQ13825 339 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 TAF5Q15542 800 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF284Q2VY69 593 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 BROXQ5VW32 411 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 ABI3BPQ7Z7G0 1075 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 ARHGEF19Q8IW93 802 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 TMIEQ8NEW7 156 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 OR52K2Q8NGK3 314 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 GRAMD1AQ96CP6 724 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 DEPDC7Q96QD5 511 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 SLC2A13Q96QE2 648 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 LGMNQ99538 433 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 POLR1BQ9H9Y6 1135 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 ASNSD1Q9NWL6 643 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 UCKL1Q9NWZ5 548 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 NLGN3Q9NZ94 848 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 PCDHB1Q9Y5F3 818 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 HS3ST3A1Q9Y663 406 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 TRPM6Q9BX84 2022 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 ATMQ13315 3056 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 A0A1W2PQU0 124 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 J3QKU1 62 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 PSMA7O14818 248 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 CLDN11O75508 207 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 MPOP05164 745 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 ALPPL2P10696 532 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 HNRNPA2B1P22626 353 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 AKT2P31751 481 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 CHRNA3P32297 505 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 DUSP3P51452 185 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 KRT83P78385 493 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 STIM1Q13586 685 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 EFHC1Q5JVL4 640 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 TTI2Q6NXR4 508 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 Q6ZVU0 165 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 ENOSF1Q7L5Y1 443 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 HORMAD1Q86X24 394 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 CIR1Q86X95 450 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 ELOA2Q8IYF1 753 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 DEFB106AQ8N104 65 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 OR2A12Q8NGT7 310 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 SMARCE1Q969G3 411 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 BMFQ96LC9 184 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 APOLD1Q96LR9 279 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 RPRD1AQ96P16 312 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 DUSP23Q9BVJ7 150 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 HDAC8Q9BY41 377 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 ASCL3Q9NQ33 180 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 GPR27Q9NS67 375 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 DDIT4Q9NX09 232 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 CA5BQ9Y2D0 317 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 CSNK1G3Q9Y6M4 447 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 COL6A6A6NMZ7 2263 aa10.1□□□□□ -0.79
TRAFD1-207ENST00000550051 LY6G6EA0A0G2JKS1 128 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 K7ESM1 405 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 USP12O75317 370 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 CSO75390 466 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 LETM1O95202 739 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 GNA14O95837 355 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 MT-CO1P00395 513 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 CTSLP07711 333 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 SRCP12931 536 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 KRT5P13647 590 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 NUMBP49757 651 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 CDH4P55283 916 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 HNRNPKP61978 463 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 GABREP78334 506 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 POM121L1PQ3SYA9 428 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 CCDC40Q4G0X9 1142 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TAF1BQ53T94 588 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 Q6ZSR6 202 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 KLK6Q92876 244 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 RNF34Q969K3 372 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 CCDC114Q96M63 670 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TIGD1Q96MW7 591 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 NOX5Q96PH1 765 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 ABCG4Q9H172 646 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 UBE2TQ9NPD8 197 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 NCKIPSDQ9NZQ3 722 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 HOOK1Q9UJC3 728 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 VPS28Q9UK41 221 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 VANGL2Q9ULK5 521 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 ZFR2Q9UPR6 939 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 U3KQA8 63 aa10.09□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF462Q96JM2 2506 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 DRGXA6NNA5 263 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 B8ZZF3 427 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 KPNA3O00505 521 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms