RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 DBN1Q16643 649 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 RPS27LQ71UM5 84 aaKnown RBP12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 DPP9Q86TI2 863 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 BHLHE22Q8NFJ8 381 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 IPMKQ8NFU5 416 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 NLGN2Q8NFZ4 835 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 DCUN1D1Q96GG9 259 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 NPY6RQ99463 290 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 GORASP1Q9BQQ3 440 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
RAPGEF3-219ENST00000549151 DAB1O75553 588 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 VAPBO95292 243 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 THRAP10827 490 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 CYP2C9P11712 490 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 CCNA1P78396 465 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 MPP1Q00013 466 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 CBLBQ13191 982 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 NAB1Q13506 487 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 TLR1Q15399 786 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ZNF280DQ6N043 979 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 KBTBD6Q86V97 674 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ADA2Q9NZK5 511 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 XPR1Q9UBH6 696 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 HDAC3O15379 428 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 HNRNPLP14866 589 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 C11orf91Q3C1V1 193 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PAOXQ6QHF9 649 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 FAM43BQ6ZT52 329 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PDZD4Q76G19 769 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 GPRIN1Q7Z2K8 1008 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ADGRG6Q86SQ4 1221 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PCDH20Q8N6Y1 951 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 SUDS3Q9H7L9 328 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ZNF408Q9H9D4 720 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 OXSMQ9NWU1 459 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 DCLK1O15075 740 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 TIMM44O43615 452 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 MPOP05164 745 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 ALOX15P16050 662 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 SMPD1P17405 629 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 CHN2P52757 468 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PLK1P53350 603 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 LILRA4P59901 499 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 MS4A2Q01362 244 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 DPYSQ14117 519 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 SEPT6Q14141 434 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 PRAMEF19Q5SWL8 479 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 MAMDC4Q6UXC1 1216 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 GPC2Q8N158 579 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
RAPGEF3-219ENST00000549151 RGSL1A5PLK6 1076 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 PIRO00625 290 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 CD4P01730 458 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 NELFEP18615 380 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 PAFAH1B3Q15102 231 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 C6orf52Q5T4I8 152 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 LAYNQ6UX15 382 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 FSTL5Q8N475 847 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 RCOR3Q9P2K3 495 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 MATN2O00339 956 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 SPATA31D3P0C874 917 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 FAM200BP0CF97 657 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 CEACAM7Q14002 265 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 PAN2Q504Q3 1202 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 SPATA31D4Q6ZUB0 917 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 PAQR9Q6ZVX9 377 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 NXNL1Q96CM4 212 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 DNAJC1Q96KC8 554 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 GRIP2Q9C0E4 1043 aa12.12□□□□□ -0.47
RAPGEF3-219ENST00000549151 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms