RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 FGF10O15520 208 aaPredicted RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 RAMP2O60895 175 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 RNASEH2AO75792 299 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 MT-CO1P00395 513 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 GOT1P17174 413 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ENGP17813 658 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 EPHB2P29323 1055 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 SERPINH1P50454 418 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 GEMIN4P57678 1058 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 ZNF252P-AS1Q0IIN9 211 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ACAP1Q15027 740 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 DAB2IPQ5VWQ8 1189 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 C22orf39Q6P5X5 142 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 PYROXD2Q8N2H3 581 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 RTL3Q8N8U3 475 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 FAM131CQ96AQ9 280 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ACE2Q9BYF1 805 aaPredicted RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 MAGEB5Q9BZ81 275 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 CATSPERBQ9H7T0 1116 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 NDFIP2Q9NV92 336 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 DONSONQ9NYP3 566 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ARHGAP20Q9P2F6 1191 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 SERGEFQ9UGK8 458 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 DNAI1Q9UI46 699 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 TPX2Q9ULW0 747 aaKnown RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 AP4E1Q9UPM8 1137 aa16.25■□□□□ 0.19
DDX54-204ENST00000546898 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.25■□□□□ 0.19
DDX54-204ENST00000546898 SPTBN2O15020 2390 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 A0A087X0T9 212 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 WASH4PA8MWX3 477 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 SLC7A4O43246 635 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 CREB3O43889 395 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 SYPP08247 313 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 TPM1P09493 284 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 FAM228BP0C875 321 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 GLDCP23378 1020 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 MAOBP27338 520 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 ARF5P84085 180 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 LINGO4Q6UY18 593 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 PSTKQ8IV42 348 aaKnown RBP16.24■□□□□ 0.19
DDX54-204ENST00000546898 HDDC3Q8N4P3 179 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
DDX54-204ENST00000546898 PCDH20Q8N6Y1 951 aaKnown RBP16.24■□□□□ 0.19
DDX54-204ENST00000546898 OR2T34Q8NGX1 318 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 PIP4K2CQ8TBX8 421 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 DNAJC7Q99615 494 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 NEUROG2Q9H2A3 272 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 OSGEPQ9NPF4 335 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 MYO1AQ9UBC5 1043 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 EIF2B4Q9UI10 523 aaKnown RBP16.24■□□□□ 0.19
DDX54-204ENST00000546898 PPM1HQ9ULR3 514 aa16.24■□□□□ 0.19
DDX54-204ENST00000546898 DCDC2BA2VCK2 349 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 C4orf47A7E2U8 309 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 K7ERQ8 282 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 ARHGAP33O14559 1287 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 CDX4O14627 284 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 TM4SF5O14894 197 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 SMAD6O43541 496 aaKnown RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 PRPSAP2O60256 369 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 LRCH4O75427 683 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 DRD3P35462 400 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 PCK1P35558 622 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 ZNF135P52742 658 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 ATXN3P54252 364 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 GALCP54803 685 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 TPI1P60174 286 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 POLD3Q15054 466 aaPredicted RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 ERMARDQ5T6L9 678 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 KIAA0895LQ68EN5 471 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 ALKBH5Q6P6C2 394 aaKnown RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 OR8K1Q8NGG5 319 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 OR2A12Q8NGT7 310 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 SNX19Q92543 992 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 BIRC7Q96CA5 298 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 SNRNP25Q9BV90 132 aaKnown RBP16.23■□□□□ 0.19
DDX54-204ENST00000546898 TRIM7Q9C029 511 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 ZDHHC5Q9C0B5 715 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 MIR1-1HGQ9H1L0 117 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 KDM4CQ9H3R0 1056 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 NENFQ9UMX5 172 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 LAMA1P25391 3075 aa16.23■□□□□ 0.19
DDX54-204ENST00000546898 C10orf142B7Z368 130 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 BCAT2O15382 392 aaPredicted RBP16.22■□□□□ 0.19
DDX54-204ENST00000546898 BNIP3LO60238 219 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 FSBPO95073 299 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 PRNPP04156 253 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 CD27P26842 260 aa16.22■□□□□ 0.19
DDX54-204ENST00000546898 MIPP30301 263 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms