RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CHD5Q8TDI0 1954 aa21.64■■□□□ 1.05
SCARB1-210ENST00000545493 CABIN1Q9Y6J0 2220 aa21.64■■□□□ 1.05
SCARB1-210ENST00000545493 C2CD4BA6NLJ0 364 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 RNF103O00237 685 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 PCDHGA12O60330 932 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 SRGAP2O75044 1071 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 STAT1P42224 750 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 C21orf59P57076 290 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 CCDC14Q49A88 953 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 MANEALQ5VSG8 457 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 FAM46CQ5VWP2 391 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 C22orf39Q6P5X5 142 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 TRIM72Q6ZMU5 477 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 ATP11CQ8NB49 1132 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 OR2A12Q8NGT7 310 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 RXFP2Q8WXD0 754 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 AASDHPPTQ9NRN7 309 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 ARHGAP20Q9P2F6 1191 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 ZMIZ1Q9ULJ6 1067 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 COL5A1P20908 1838 aaPredicted RBP21.63■■□□□ 1.05
SCARB1-210ENST00000545493 PTPRBP23467 1997 aa21.63■■□□□ 1.05
SCARB1-210ENST00000545493 A0A1B0GTQ1 180 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 CD38P28907 300 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 OR1E1P30953 314 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 TAS2R38P59533 333 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 SHBQ15464 509 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 CCDC183Q5T5S1 534 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 PIP5KL1Q5T9C9 394 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 CHST14Q8NCH0 376 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 RHBDD1Q8TEB9 315 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 SERAC1Q96JX3 654 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 ERGIC2Q96RQ1 377 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 ZYG11BQ9C0D3 744 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 KDM4CQ9H3R0 1056 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 TPX2Q9ULW0 747 aaKnown RBP21.62■■□□□ 1.05
SCARB1-210ENST00000545493 PLXNB3Q9ULL4 1909 aa21.62■■□□□ 1.05
SCARB1-210ENST00000545493 DOCK9Q9BZ29 2069 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3DA0A087WVF3 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3IA0A087WXS9 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3EA0A087X179 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3KA0A087X1G2 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ILVBLA1L0T0 632 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TMEM8BA6NDV4 472 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3FA6NER0 549 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3LB9A6J9 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ZNF821O75541 412 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ZMPSTE24O75844 475 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 DKK1O94907 266 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3HP0C7X1 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 MAT2AP31153 395 aaKnown RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 SDC4P31431 198 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 GRK6P43250 576 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 PTPN9P43378 593 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 CLCN6P51797 869 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ARF5P84085 180 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 CLEC16AQ2KHT3 1053 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 PRAMEF14Q5SWL7 426 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3GQ6DHY5 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3CQ6IPX1 549 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 NAPEPLDQ6IQ20 393 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ZNF783Q6ZMS7 281 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TRIM69Q86WT6 500 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 TBC1D3Q8IZP1 549 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 NEK11Q8NG66 645 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ZCCHC14Q8WYQ9 949 aaKnown RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ARRDC3Q96B67 414 aa21.61■■□□□ 1.05
SCARB1-210ENST00000545493 PCMTD1Q96MG8 357 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 ELF4Q99607 663 aaPredicted RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 PPARGC1AQ9UBK2 798 aaKnown RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 APOBEC2Q9Y235 224 aaKnown RBP21.61■■□□□ 1.05
SCARB1-210ENST00000545493 GOLGA6L22H0YM25 854 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 MBD3O95983 291 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 ATXN1LP0C7T5 689 aaKnown RBP21.6■■□□□ 1.05
SCARB1-210ENST00000545493 ATP1A3P13637 1013 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 CHRNA3P32297 505 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 NSFP46459 744 aaKnown RBP21.6■■□□□ 1.05
SCARB1-210ENST00000545493 SERPINH1P50454 418 aaKnown RBP21.6■■□□□ 1.05
SCARB1-210ENST00000545493 HDAC4P56524 1084 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 NXPH1P58417 271 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 NRG1Q02297 640 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-210ENST00000545493 UBXN1Q04323 297 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 SUZ12Q15022 739 aaKnown RBP21.6■■□□□ 1.05
SCARB1-210ENST00000545493 DRC7Q8IY82 874 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 AOPEPQ8N6M6 819 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 CCDC185Q8N715 623 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 ANKRD20A12PQ8NF67 263 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 CCDC114Q96M63 670 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 CDC6Q99741 560 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 TNKS2Q9H2K2 1166 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 ATP13A1Q9HD20 1204 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 NDFIP2Q9NV92 336 aa21.6■■□□□ 1.05
SCARB1-210ENST00000545493 LRRC10BA6NIK2 292 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 FAM72CH0Y354 149 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 CBX4O00257 560 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 TYRO3Q06418 890 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 FAM72AQ5TYM5 149 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 FAM72DQ6L9T8 149 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 MON1BQ7L1V2 547 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 STRADAQ7RTN6 431 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 NLRP14Q86W24 1093 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms