RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 DLDP09622 509 aaKnown RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 CD72P21854 359 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 CCNCP24863 283 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 OTUD4Q01804 1114 aaKnown RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 SLC20A2Q08357 652 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 PDK1Q15118 436 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 E2F5Q15329 346 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 DGKKQ5KSL6 1271 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 RETSATQ6NUM9 610 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 ARHGAP36Q6ZRI8 547 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 TRIM67Q6ZTA4 783 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 SYNPOQ8N3V7 929 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 FRMD8P1Q9BZ68 369 aaPredicted RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 BRD8Q9H0E9 1235 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 THAP10Q9P2Z0 257 aaPredicted RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 RNF14Q9UBS8 474 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 IPO11Q9UI26 975 aaKnown RBP13.36□□□□□ -0.27
DDX11-227ENST00000544652 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 ERVW-1Q9UQF0 538 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 CEP192Q8TEP8 1941 aa13.36□□□□□ -0.27
DDX11-227ENST00000544652 ANTXRLA6NF34 631 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 HACD1B0YJ81 288 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 J3KR12 359 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 CBX4O00257 560 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 PGRMC1O00264 195 aaKnown RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 PPP1R12AO14974 1030 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 NPC1O15118 1278 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 CTSOP43234 321 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 GEMIN4P57678 1058 aaKnown RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 LONRF2Q1L5Z9 754 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 TIGD7Q6NT04 549 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 SH2D3CQ8N5H7 860 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 CCDC26Q8TAB7 109 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 SORCS1Q8WY21 1168 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 MAML1Q92585 1016 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 HAUS1Q96CS2 278 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 ZNF599Q96NL3 588 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 TMEM245Q9H330 911 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 SLC25A13Q9UJS0 675 aa13.35□□□□□ -0.27
DDX11-227ENST00000544652 R3HDM2Q9Y2K5 976 aaKnown RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 MTF2Q9Y483 593 aaPredicted RBP13.35□□□□□ -0.27
DDX11-227ENST00000544652 MAP3K7O43318 606 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 ATP9BO43861 1147 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 MT-CO1P00395 513 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 SRCP12931 536 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 NUMBP49757 651 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 SERPINH1P50454 418 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 LRRC32Q14392 662 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 ZNF234Q14588 700 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 RFTN1Q14699 578 aaPredicted RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 CCNG2Q16589 344 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 CYP1B1Q16678 543 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 HSF5Q4G112 596 aaPredicted RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 EGFLAMQ63HQ2 1017 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 METTL3Q86U44 580 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 CCDC13Q8IYE1 715 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 CCDC33Q8N5R6 958 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 ZNF513Q8N8E2 541 aaPredicted RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 PJA1Q8NG27 643 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 USP33Q8TEY7 942 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 CYB5D2Q8WUJ1 264 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 CLDN23Q96B33 292 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 QKIQ96PU8 341 aaKnown RBP eCLIP13.34□□□□□ -0.27
DDX11-227ENST00000544652 LGMNQ99538 433 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 FOXQ1Q9C009 403 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 SP110Q9HB58 689 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 NDRG2Q9UN36 371 aaKnown RBP13.34□□□□□ -0.27
DDX11-227ENST00000544652 LRRK1Q38SD2 2015 aa13.34□□□□□ -0.27
DDX11-227ENST00000544652 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 CHURC1-FNTBB4DL54 471 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 MATN3O15232 486 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 LIASO43766 372 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 RNF40O75150 1001 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 ZNF821O75541 412 aaPredicted RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 RBP3P10745 1247 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 VAV1P15498 845 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms