RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ZYG11BQ9C0D3 744 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 RETREG1Q9H6L5 497 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 EBF2Q9HAK2 575 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 TAB2Q9NYJ8 693 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
RTN3-212ENST00000543123 TP53BP1Q12888 1972 aaPredicted RBP13.43□□□□□ -0.26
RTN3-212ENST00000543123 LDOC1O95751 146 aaPredicted RBP13.43□□□□□ -0.26
RTN3-212ENST00000543123 WNT1P04628 370 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 MMEP08473 750 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 C1SP09871 688 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 TFE3P19532 575 aaPredicted RBP13.43□□□□□ -0.26
RTN3-212ENST00000543123 EPHA8P29322 1005 aaPredicted RBP13.43□□□□□ -0.26
RTN3-212ENST00000543123 MAT2AP31153 395 aaKnown RBP13.43□□□□□ -0.26
RTN3-212ENST00000543123 CHRNA3P32297 505 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 HNF1BP35680 557 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 FLT3P36888 993 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CDR2Q01850 454 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 ZNF683Q8IZ20 524 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 TMIEQ8NEW7 156 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 SAP25Q8TEE9 199 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CPA5Q8WXQ8 436 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CEP44Q9C0F1 390 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 TMEM59LQ9UK28 342 aa13.43□□□□□ -0.26
RTN3-212ENST00000543123 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 CBX4O00257 560 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ENC1O14682 589 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SNAP91O60641 907 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ABCB7O75027 752 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 GFPT2O94808 682 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 MMP8P22894 467 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 RRM1P23921 792 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SDC4P31431 198 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SOX5P35711 763 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 RXRGP48443 463 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 METAP1P53582 386 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 GEMIN4P57678 1058 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 SYCP1Q15431 976 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SMAD1Q15797 465 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 C22orf39Q6P5X5 142 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 FAM131BQ86XD5 332 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 GATAD2AQ86YP4 633 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 OR2A12Q8NGT7 310 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 CNDP2Q96KP4 475 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 PSMB7Q99436 277 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 VPS16Q9H269 839 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 GANQ9H2C0 597 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ATP13A1Q9HD20 1204 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ANLNQ9NQW6 1124 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 ARHGAP20Q9P2F6 1191 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 IL36AQ9UHA7 158 aa13.42□□□□□ -0.26
RTN3-212ENST00000543123 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
RTN3-212ENST00000543123 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 A0A0D9SEW6 157 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
RTN3-212ENST00000543123 PLK4O00444 970 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 RFPL3O75679 317 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 MT-CO1P00395 513 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 AKT2P31751 481 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 STAT1P42224 750 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
RTN3-212ENST00000543123 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
RTN3-212ENST00000543123 ATP11AP98196 1134 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 ILKQ13418 452 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 KRT31Q15323 416 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 LINGO4Q6UY18 593 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 TMPRSS12Q86WS5 348 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 FAM174AQ8TBP5 190 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 KLHDC7BQ96G42 594 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
RTN3-212ENST00000543123 HDAC8Q9BY41 377 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 DKK4Q9UBT3 224 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 SNX10Q9Y5X0 201 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 PTPRBP23467 1997 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 ITPR1Q14643 2758 aa13.41□□□□□ -0.26
RTN3-212ENST00000543123 A0A1W2PQU0 124 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 ANKRD62A6NC57 917 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 K7ERQ8 282 aa13.4□□□□□ -0.26
RTN3-212ENST00000543123 WNT9AO14904 365 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms