RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 SETD3Q86TU7 594 aaPredicted RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 PRPF39Q86UA1 669 aaKnown RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 TRIM69Q86WT6 500 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 DCAF4L2Q8NA75 395 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 CHST14Q8NCH0 376 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 ARRDC3Q96B67 414 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 C1orf74Q96LT6 269 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 C2orf49Q9BVC5 232 aaPredicted RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 METTL5Q9NRN9 209 aaKnown RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 FTSJ1Q9UET6 329 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 TPX2Q9ULW0 747 aaKnown RBP12.35□□□□□ -0.43
PTPN6-220ENST00000543115 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
PTPN6-220ENST00000543115 ZNF821O75541 412 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-220ENST00000543115 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 ENDOD1O94919 500 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 GJB6O95452 261 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CYP1A1P04798 512 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-220ENST00000543115 ITGAVP06756 1048 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 OR1E1P30953 314 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CHRNA3P32297 505 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CLDN6P56747 220 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 JAM2P57087 298 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
PTPN6-220ENST00000543115 ATP11AP98196 1134 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 FMO1Q01740 532 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 KRT31Q15323 416 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CT47A1Q5JQC4 288 aaPredicted RBP12.34□□□□□ -0.43
PTPN6-220ENST00000543115 C22orf39Q6P5X5 142 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 EID2Q8N6I1 236 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 KLK6Q92876 244 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 HAPLN3Q96S86 360 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 MYOCQ99972 504 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 MAGEB5Q9BZ81 275 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 TNKS2Q9H2K2 1166 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CCDC86Q9H6F5 360 aaKnown RBP12.34□□□□□ -0.43
PTPN6-220ENST00000543115 CAAP1Q9H8G2 361 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 NLRC4Q9NPP4 1024 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 DMTF1Q9Y222 760 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 ACTL7AQ9Y615 435 aa12.34□□□□□ -0.43
PTPN6-220ENST00000543115 KPNA3O00505 521 aaPredicted RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ENC1O14682 589 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 PRLRP16471 622 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 MMP8P22894 467 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SOX5P35711 763 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 RXRGP48443 463 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ARF5P84085 180 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 CDR2Q01850 454 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SMAD1Q15797 465 aaKnown RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 CDO1Q16878 200 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 C15orf59Q2T9L4 293 aaPredicted RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 INAVAQ3KP66 663 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SLC45A4Q5BKX6 768 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ARCQ7LC44 396 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 JOSD2Q8TAC2 188 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 GRIN3AQ8TCU5 1115 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 CNDP2Q96KP4 475 aaKnown RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 PCDHB18PQ96TA0 734 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 C11orf70Q9BRQ4 267 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ZYG11BQ9C0D3 744 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ERVMER34-1Q9H9K5 563 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 FZD3Q9NPG1 666 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 FAM207AQ9NSI2 230 aaPredicted RBP12.33□□□□□ -0.44
PTPN6-220ENST00000543115 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 IGF2RP11717 2491 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 ZZEF1O43149 2961 aa12.33□□□□□ -0.44
PTPN6-220ENST00000543115 PTPRBP23467 1997 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
PTPN6-220ENST00000543115 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 ILVBLA1L0T0 632 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 TRABD2BA6NFA1 517 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 FAM72CH0Y354 149 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 PRAMEF26H0Y7S4 382 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 SLC31A1O15431 190 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 YKT6O15498 198 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 SDC3O75056 442 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 LDOC1O95751 146 aaPredicted RBP12.32□□□□□ -0.44
PTPN6-220ENST00000543115 CD160O95971 181 aa12.32□□□□□ -0.44
PTPN6-220ENST00000543115 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
PTPN6-220ENST00000543115 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
PTPN6-220ENST00000543115 ACADVLP49748 655 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms