RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ARF5P84085 180 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 CKAP4Q07065 602 aaKnown RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 BYSLQ13895 437 aaKnown RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 RFTN1Q14699 578 aaPredicted RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 PRKD1Q15139 912 aaPredicted RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 INO80DQ53TQ3 878 aaPredicted RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 TMCO4Q5TGY1 634 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 PRELID2Q8N945 189 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 KDM1BQ8NB78 822 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 ATG4AQ8WYN0 398 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 NKD2Q969F2 451 aaPredicted RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 QKIQ96PU8 341 aaKnown RBP eCLIP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 FAM118BQ9BPY3 351 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 UBA2Q9UBT2 640 aaPredicted RBP23.57■■□□□ 1.36
HOMER3-205ENST00000542541 SLC8A2Q9UPR5 921 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 HS3ST2Q9Y278 367 aa23.57■■□□□ 1.36
HOMER3-205ENST00000542541 KANSL1LA0AUZ9 987 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 K7EQS6 105 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 DCXO43602 365 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 VASPP50552 380 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-205ENST00000542541 DGKKQ5KSL6 1271 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 HEATR6Q6AI08 1181 aaKnown RBP23.56■■□□□ 1.36
HOMER3-205ENST00000542541 EDAQ92838 391 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 PDFQ9HBH1 243 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 DNPEPQ9ULA0 475 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 NDRG2Q9UN36 371 aaKnown RBP23.56■■□□□ 1.36
HOMER3-205ENST00000542541 TTC28Q96AY4 2481 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 NUP205Q92621 2012 aa23.56■■□□□ 1.36
HOMER3-205ENST00000542541 BCLAF3A2AJT9 711 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 EGFP01133 1207 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 ALADP13716 330 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CTSOP43234 321 aaPredicted RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 RENBPP51606 427 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CLCN6P51797 869 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 SIGLEC14Q08ET2 396 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 HNRNPDQ14103 355 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 LINGO4Q6UY18 593 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 BBS5Q8N3I7 341 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 ATP11CQ8NB49 1132 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CYB5D2Q8WUJ1 264 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 SORCS1Q8WY21 1168 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 MAGOHBQ96A72 148 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 HAUS2Q9NVX0 235 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 ZNF148Q9UQR1 794 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 DRG1Q9Y295 367 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 MRFAP1Q9Y605 127 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CFAP69A5D8W1 941 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CCDC188H7C350 402 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 PDE2AO00408 941 aaPredicted RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 NEBLO76041 1014 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CCNB1P14635 433 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 STIP1P31948 543 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 SERPINH1P50454 418 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 SNX1Q13596 522 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 CYP1B1Q16678 543 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 MARC1Q5VT66 337 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 SFTPA1Q8IWL2 248 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 C12orf50Q8NA57 414 aaPredicted RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 HTR3CQ8WXA8 447 aa23.55■■□□□ 1.36
HOMER3-205ENST00000542541 RPL10LQ96L21 214 aaKnown RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 THAP10Q9P2Z0 257 aaPredicted RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 FEZ2Q9UHY8 353 aaPredicted RBP23.55■■□□□ 1.36
HOMER3-205ENST00000542541 HNRNPLP14866 589 aaKnown RBP eCLIP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 MRPS21P82921 87 aaKnown RBP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LMNB2Q03252 620 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 CCINQ13939 588 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LRRC32Q14392 662 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LBRQ14739 615 aaKnown RBP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 PTPRNQ16849 979 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LEKR1Q6ZMV7 388 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 TRMT11Q7Z4G4 463 aaKnown RBP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 SYNPOQ8N3V7 929 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 ZNF513Q8N8E2 541 aaPredicted RBP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LRRN4Q8WUT4 740 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 MAML1Q92585 1016 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 EZH1Q92800 747 aaPredicted RBP23.54■■□□□ 1.36
HOMER3-205ENST00000542541 VAT1Q99536 393 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 LTB4R2Q9NPC1 389 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 KIAA1549LQ6ZVL6 1849 aa23.54■■□□□ 1.36
HOMER3-205ENST00000542541 CHD5Q8TDI0 1954 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 STK25O00506 426 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 PHF2O75151 1096 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 STK10O94804 968 aaKnown RBP23.53■■□□□ 1.36
HOMER3-205ENST00000542541 MT-CO1P00395 513 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 ITGAVP06756 1048 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 RBL1P28749 1068 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 CHRNA3P32297 505 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 KIR2DL1P43626 348 aaPredicted RBP23.53■■□□□ 1.36
HOMER3-205ENST00000542541 UBXN2BQ14CS0 331 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 OASLQ15646 514 aaKnown RBP23.53■■□□□ 1.36
HOMER3-205ENST00000542541 ACCSLQ4AC99 568 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 FNDC3BQ53EP0 1204 aaKnown RBP23.53■■□□□ 1.36
HOMER3-205ENST00000542541 SH2D3CQ8N5H7 860 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 MNS1Q8NEH6 495 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 MRGPRX3Q96LB0 322 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 TBC1D17Q9HA65 648 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 SEPT3Q9UH03 358 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 AMACRQ9UHK6 382 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 SLCO3A1Q9UIG8 710 aa23.53■■□□□ 1.36
HOMER3-205ENST00000542541 FAM170BA6NMN3 283 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms