RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 SREBF1P36956 1147 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF268Q14587 947 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SAMD4BQ5PRF9 694 aaKnown RBP10.89□□□□□ -0.67
GABRB3-204ENST00000541819 LYPLAL1Q5VWZ2 237 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 DHRSXQ8N5I4 330 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-204ENST00000541819 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 PTGFRNQ9P2B2 879 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 RPS6KA6Q9UK32 745 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 A0A096LPK6 155 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SSNA1O43805 119 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-204ENST00000541819 VAPBO95292 243 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SCTRP47872 440 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SRSF11Q05519 484 aaKnown RBP10.89□□□□□ -0.67
GABRB3-204ENST00000541819 LGALS3BPQ08380 585 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 TXNRD3Q86VQ6 643 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SELENOMQ8WWX9 145 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 MCRS1Q96EZ8 462 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 CRELD1Q96HD1 420 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 SLC25A23Q9BV35 468 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 COG5Q9UP83 839 aa10.89□□□□□ -0.67
GABRB3-204ENST00000541819 MAGEB3O15480 346 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 YBX3P16989 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 ITGA2P17301 1181 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 DET1Q7L5Y6 550 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 ABRAQ8N0Z2 381 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 GMCL1P1Q8NEA9 526 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 PNMA5Q96PV4 448 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 APBA2Q99767 749 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CD248Q9HCU0 757 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 ABCC13Q9NSE7 274 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 FBXO28Q9NVF7 368 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF214Q9UL59 606 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 SHOC2Q9UQ13 582 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 DISP1Q96F81 1524 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 PTGES3LE9PB15 166 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 UGT1A5P35504 534 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CDK7P50613 346 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 IRF8Q02556 426 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CXXC5Q7LFL8 322 aaKnown RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 TAF8Q7Z7C8 310 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 C8orf59Q8N0T1 100 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 VAT1Q99536 393 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 VPS45Q9NRW7 570 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 KLQ9UEF7 1012 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 MRTO4Q9UKD2 239 aaKnown RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 QSOX1O00391 747 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 HNRNPH1P31943 449 aaKnown RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 PDX1P52945 283 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 GIT2Q14161 759 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 MCEMP1Q8IX19 187 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 NELL1Q92832 810 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 KCNS3Q9BQ31 491 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CCDC177Q9NQR7 707 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 IL1R1P14778 569 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CBX5P45973 191 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 GRB14Q14449 540 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 IQCF2Q8IXL9 164 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 TMEM86AQ8N2M4 240 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 PJA1Q8NG27 643 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 QKIQ96PU8 341 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 C2orf49Q9BVC5 232 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 VPS4AQ9UN37 437 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 CCNDBP1O95273 360 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 FTH1P02794 183 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 INSRRP14616 1297 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 MAPK8P45983 427 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 TSPAN14Q8NG11 270 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 OXNAD1Q96HP4 312 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-204ENST00000541819 MPP4Q96JB8 637 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 UROC1Q96N76 676 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 LMAN2LQ9H0V9 348 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 NFASCO94856 1347 aa10.88□□□□□ -0.67
GABRB3-204ENST00000541819 F8VZ95 297 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 FGF10O15520 208 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ADCY6O43306 1168 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ME2P23368 584 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ITGA3P26006 1051 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 PSEN2P49810 448 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 WASHC2DQ5SRD0 308 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 TAS1R2Q8TE23 839 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 PAIP1Q9H074 479 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms