RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CES2O00748 559 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 NKX2-8O15522 239 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 DHHO43323 396 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 TMPRSS11DO60235 418 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 DOK2O60496 412 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CCNT1O60563 726 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 HNRNPCL1O60812 293 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ALDOAP04075 364 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CHN1P15882 459 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 PSMA4P25789 261 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 EPHB2P29323 1055 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 GKP32189 559 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 IGHMBP2P38935 993 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CCT4P50991 539 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CDH15P55291 814 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SNX16P57768 344 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 GOLGA8DPQ0D2H9 430 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CHAF1BQ13112 559 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 THOC5Q13769 683 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 PSMD6Q15008 389 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 TBCEQ15813 527 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 GPR162Q16538 588 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CEP78Q5JTW2 689 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF626Q68DY1 528 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SERPINA13PQ6UXR4 307 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ENOSF1Q7L5Y1 443 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 RRM2BQ7LG56 351 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 YTHDF3Q7Z739 585 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 NEK8Q86SG6 692 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SFTPA1Q8IWL2 248 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 TAGAPQ8N103 731 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 GALNT4Q8N4A0 578 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF366Q8N895 744 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 TNIP2Q8NFZ5 429 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 KCNG4Q8TDN1 519 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 KCNJ9Q92806 393 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SAAL1Q96ER3 474 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 FUZQ9BT04 418 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 QTRT1Q9BXR0 403 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 NRIP3Q9NQ35 241 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ANKEF1Q9NU02 776 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF70Q9UC06 446 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 SLC25A13Q9UJS0 675 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 TMEM5Q9Y2B1 443 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 FAM135AQ9P2D6 1515 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 KIDINS220Q9ULH0 1771 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.54□□□□□ -1.687e-33■□□□□ 8.4
SNHG1-217ENST00000541578 DEPDC5O75140 1603 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 MYO3AQ8NEV4 1616 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 LOC105369274A0A096LPK9 316 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SYNDIG1LA6NDD5 238 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 PABPN1LA6NDY0 278 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SH2D7A6NKC9 451 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 UBE2Q2LH0YL09 131 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 H3BNC9 293 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 M0QYT0 321 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 PLOD3O60568 738 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 PMPCBO75439 489 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 F9P00740 461 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 CHRM5P08912 532 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 UBL4AP11441 157 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 FPR3P25089 353 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 ADRA1DP25100 572 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 HOXD12P35452 270 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 CTCFP49711 727 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 RPL15P61313 204 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SSBP2P81877 361 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 NEXNQ0ZGT2 675 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 DCTN2Q13561 401 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 DCTN1Q14203 1278 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 KCNJ12Q14500 433 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 CERKLQ49MI3 558 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 AASDHQ4L235 1098 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 RNASE12Q5GAN4 147 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 MEX3CQ5U5Q3 659 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 LRCH2Q5VUJ6 765 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SLC18B1Q6NT16 456 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 OR4N4Q8N0Y3 316 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SRFBP1Q8NEF9 429 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 METTL6Q8TCB7 284 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 CALML4Q96GE6 196 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 RITA1Q96K30 269 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 C5orf34Q96MH7 638 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF778Q96MU6 729 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 MPHOSPH8Q99549 860 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SH2D3AQ9BRG2 576 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 C1QTNF7Q9BXJ2 289 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 FTOQ9C0B1 505 aaKnown RBP eCLIP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 GHITMQ9H3K2 345 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 SMYD2Q9NRG4 433 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 MGAT4CQ9UBM8 478 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 ADD3Q9UEY8 706 aaKnown RBP4.54□□□□□ -1.68
SNHG1-217ENST00000541578 TBC1D29Q9UFV1 150 aa4.54□□□□□ -1.68
SNHG1-217ENST00000541578 NOL7Q9UMY1 257 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms